Hyphomicrobium sp. MC1: HYPMC_4563
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Entry
HYPMC_4563 CDS
T01557
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03030
DNA replication
hmc03430
Mismatch repair
hmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYPMC_4563 (dnaQ)
03430 Mismatch repair
HYPMC_4563 (dnaQ)
03440 Homologous recombination
HYPMC_4563 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmc03032
]
HYPMC_4563 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_4563 (dnaQ)
Enzymes [BR:
hmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYPMC_4563 (dnaQ)
DNA replication proteins [BR:
hmc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYPMC_4563 (dnaQ)
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYPMC_4563 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CCB67772
LinkDB
All DBs
Position
4393319..4394029
Genome browser
AA seq
236 aa
AA seq
DB search
MREIVLDTETTGLDPKKGHRLIEVGGIEMINRIPTGREFHRFINPQRDVPREAQEIHGIA
TEFLFDKPLFKDVARDLLAFLADDVLVIHNAQFDIMFLNYELGLVGEKPISFDRVVDTLA
IARRRHPAGPNTLDGLCKRYSIDNSVRTKHGALVDSLLLAEVYVELLGERQAALGLQTVG
AKANGMRPGAGRTLAAVRPEPLPPRIGEADIAAHQSFIEKMKTPALWLNFWNKTSA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatcgttctcgacacggaaacaacgggcctcgatccgaaaaagggtcatcgc
ctgattgaagtcggcggtatcgagatgatcaaccgcattccgacgggacgcgagtttcat
cgtttcatcaatccgcagcgcgacgtgccgagggaagcgcaagagattcacgggatcgcg
acggagttcctgttcgacaagccgctgttcaaggacgtggcgcgcgatctgctagcgttt
ctggcggatgacgttctcgtcattcacaacgcgcaattcgacatcatgtttctcaattac
gagctggggctcgtcggtgagaagccgatcagcttcgatcgcgtggtcgatacgctcgcg
atcgcacggcgtcgccatccggcgggcccgaatacgctcgacggattgtgcaaacgatat
tccatcgacaattccgtgcgcacgaagcatggcgcgcttgtcgacagtttgctgctggcg
gaagtttacgtcgagctgctcggcgaacgtcaggcggcgctcggattgcagaccgtcggc
gcgaaagcaaacggcatgcggcccggcgcagggcgcactctcgcggcggttcggccggag
ccgctaccgccgcgcattggcgaggccgacatcgccgcgcaccagtcgtttatcgagaaa
atgaagacgccggcgctttggctcaacttttggaataaaacgtcggcgtga
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