Hyphomicrobium sp. MC1: HYPMC_4603
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Entry
HYPMC_4603 CDS
T01557
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00020
Citrate cycle (TCA cycle)
hmc00190
Oxidative phosphorylation
hmc00650
Butanoate metabolism
hmc00720
Other carbon fixation pathways
hmc01100
Metabolic pathways
hmc01110
Biosynthesis of secondary metabolites
hmc01120
Microbial metabolism in diverse environments
hmc01200
Carbon metabolism
Module
hmc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hmc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hmc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HYPMC_4603 (sdhB)
00650 Butanoate metabolism
HYPMC_4603 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
HYPMC_4603 (sdhB)
00720 Other carbon fixation pathways
HYPMC_4603 (sdhB)
Enzymes [BR:
hmc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HYPMC_4603 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer2
Fer4_9
RickCE_cat
Motif
Other DBs
NCBI-ProteinID:
CCB67811
UniProt:
F8JDZ2
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All DBs
Position
4428033..4428812
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AA seq
259 aa
AA seq
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MVQLTLPKNSTISEGKTWNRPDREGDWKEFRIYRWNPDDERNPRVDTYHIDQKQCGPMVL
DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGTNTLACLKGIEDVKGPVKVYPLPHME
VVKDLVPDLTNFYAQHRSIEPWLKTDTPTPPKEWKQSREDREKLDGLYECILCACCSSSC
PSYWWNSDRYLGPAILLQAYRWVIDSRDEATGERLDNLEDPFRLYRCHTIMNCAKACPKG
LSPAKAIAELKKLMVERRV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggttcagctcactcttccgaaaaattcgacaatctccgaaggcaagacctggaatagg
ccggaccgcgagggggattggaaggaattccggatttatcgctggaatccggatgacgaa
cgcaatccgcgcgtcgacacctatcatatcgatcagaagcagtgcggaccgatggttctt
gacgctctgatcaagatcaagaacgagatcgatccgacgctgacgttccgccgctcgtgc
cgcgaaggcatttgtggctcgtgcgcgatgaatatcgacggcaccaatacactcgcgtgc
ctgaagggcatcgaagacgtcaaaggtcctgtaaaggtttatccgctgccgcacatggaa
gtcgtcaaagacctcgtgccggatctcacgaatttctacgcgcagcatcgctccatcgag
ccgtggctcaagaccgatacgccgacgccgccgaaggagtggaagcagtcgcgcgaagat
cgtgagaagctcgacgggctttacgagtgcatcttgtgcgcatgctgctcctcgtcgtgc
ccgagctactggtggaactcggatcgctacctcggccctgccattctgctgcaggcctat
cgctgggtgatcgacagccgtgacgaagcgacgggcgagcgcctcgacaatctggaagat
ccgttccggctctatcgctgccacacgatcatgaattgcgccaaggcttgtccgaaaggc
ttgtcgccggccaaagccatcgccgaactcaagaaactgatggtcgagcgacgcgtgtaa
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