Hyphomicrobium sp. MC1: HYPMC_4624
Help
Entry
HYPMC_4624 CDS
T01557
Name
(GenBank) MiaB-like tRNA modifying enzyme, putative 2-methylthioadenine synthetase
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_4624
Enzymes [BR:
hmc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
HYPMC_4624
Transfer RNA biogenesis [BR:
hmc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HYPMC_4624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
CCB67832
UniProt:
F8JE10
LinkDB
All DBs
Position
4449986..4451248
Genome browser
AA seq
420 aa
AA seq
DB search
MSEPQVITLGCRLNTYESEVMRRHAREAGLDNAIIVNTCAVTGEAVRQAAQTVRRLRREK
PNARIIVTGCAAQIEPERFADMPEVDHVVGNAEKMQAETFAGLSIADGERVQVNDIMSVR
DTALHMIDGFGSRTRAYVQIQNGCDHRCTFCIIPFGRGPSRSVAAGEVVTQVRRLVEKGY
AEIVLTGVDITSYGRDLPGSATLGKLVRQVLKHVPELARLRLSSIDQVEADDDLMIALRD
EERLMPHLHLSLQAGDDLTLKRMKRRHLRSDAIAFCEKARALRPDIVFGADLIAGFPTET
DQMFENSYRIVDECGLTYLHVFPFSARRGTPAARMPQVNSTIIKERAARLREKGTNVLAS
YLQSQRGRVVDVLVESDGKGRTPQFAEVLLHGEAPFGAGAVIRTEIKGADAQHLIGEACA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacctcaggtgatcacgctcggctgccggctcaacacgtatgagtccgaagtg
atgcgccgtcacgcgcgcgaggcaggtctcgataacgcgattatcgtcaatacgtgcgcg
gtgacgggcgaagcggtgcgtcaggcggcgcaaacggttcgcaggctgcggcgtgagaag
cccaatgcgcggatcatcgtgacgggatgcgcggcgcaaatcgagcctgaacgtttcgcc
gacatgccagaagtcgatcatgttgtcggcaacgccgagaagatgcaggcagagacgttc
gccgggctgtcgattgcggacggcgaacgcgtgcaggtcaacgacatcatgagcgtgcgt
gatacggcgctgcacatgatcgatggtttcggttcgcgcacgcgggcctatgtgcaaatt
cagaacggctgcgatcatcgctgcacgttctgcatcatccctttcggccgtgggccgtcg
cgatcggtcgcggcgggcgaagtcgtgacgcaggtgcgcaggcttgtcgagaagggctac
gccgagatcgtgctgaccggcgtcgacatcacgtcatacggccgcgatctgccgggttct
gcgacgctcggcaaactcgttcggcaggtgctgaagcatgtgccggagttggcgcgcttg
cggctgtcgtcgatcgatcaggtcgaagccgacgacgatctgatgatcgcattacgcgat
gaggaacgtctgatgccgcatctgcatttgtctttgcaggcaggcgatgatctgacgttg
aagcgcatgaagcgacggcatttgcggtctgatgcaattgcgttttgcgaaaaggcgcgc
gccctgcgtcccgatatcgtgttcggggccgatctgattgcaggctttccgacggaaacc
gatcagatgttcgagaattcctatcgtatcgtcgatgagtgcggtctgacgtatctgcac
gtctttccgttctcggcgcggcgcggcacgccggccgcccgcatgccgcaagtcaacagc
accatcatcaaggagcgcgcggcaaggctgcgtgaaaaaggaacaaacgtgctcgcttcg
tatcttcaatcgcaacgcggccgtgtcgtcgatgtgctcgtcgaaagtgacggcaaggga
cgcacgccgcaattcgccgaagtgctgcttcacggagaggcgccgtttggcgctggggcg
gtcattcggacggaaatcaagggcgccgatgcgcaacatctgatcggcgaggcgtgcgcg
tga
DBGET
integrated database retrieval system
