Hyphomicrobium sp. MC1: HYPMC_4775
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Entry
HYPMC_4775 CDS
T01557
Symbol
miaB
Name
(GenBank) tRNA modification enzyme MiaB, putative isopentenyl-adenosine A37 tRNA methylthiolase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_4775 (miaB)
Enzymes [BR:
hmc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HYPMC_4775 (miaB)
Transfer RNA biogenesis [BR:
hmc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HYPMC_4775 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
MCCD1
Motif
Other DBs
NCBI-ProteinID:
CCB67983
UniProt:
F8JD77
LinkDB
All DBs
Position
complement(4579149..4580498)
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AA seq
449 aa
AA seq
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MQRPNTKSYYLKTFGCQMNVYDSERMTEALARDGYAATDDIAGADLVILNTCHIREKAAE
KVYSDLGRIRDMKDARKRDGKETVIAVAGCVAQAEGREITTRQPAVDLVIGPQSYHRLPE
LIERTANTREHIVETEFPGDEKFERMKAPRRVSSPSAFLTVQEGCDKFCTFCVVPYTRGA
EFSRSLVKLEAEARELIAAGAKELVLLGQNVNAYHGEGPDGRTIGLAELIRRLADIEGVE
RIRYTTSHPRDMDADLIAAHAEVPQLMPFLHLPVQSGSDRMLAAMNRKHRAEEYLDLIGR
LRSARPDLALSSDFIVGFPGETDQDAEDTLSLIRAVGFAQAFSFKYSPRPGTPASTHEGQ
VPEEVKSERLQRLQALLDDQQADFNTQALGMTVPVLFERRGRQPGEFVGRTPYLQLVHVA
AEGDLVGRTANVAVTDARRVSLSGVIAAA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgcccgaacaccaaaagctattatttgaagaccttcggctgtcagatgaacgtc
tacgacagcgagcgtatgacggaagcactggcgcgcgacggctatgccgcgacggacgac
atcgctggcgccgatctcgtcatcctcaatacctgccacatccgtgagaaagccgctgag
aaagtctattccgatctcggccgcattcgcgacatgaaggacgcgcgaaagcgcgacggc
aaggaaaccgtgatcgccgtggcaggctgcgtggcacaagccgaaggccgcgagatcaca
acccgtcagcctgcggtcgatctcgtcatcggcccgcaaagctatcatcgtttgcccgaa
ctgatcgaacgcaccgcgaatacccgcgagcacatcgtcgaaacagaatttcccggcgac
gaaaagttcgagcgcatgaaagcgccgcgccgcgtgtcgtcgccgtccgcatttctgacc
gtgcaggaaggctgcgataagttctgcaccttctgcgtcgtgccctacacgcgcggcgct
gagttttcgcgctcgctcgtaaagctcgaagccgaagcccgcgagctgatcgcggcagga
gccaaagagcttgtgctgcttggccagaacgtcaacgcctatcacggcgaaggccctgac
ggccgcacgatcggcctcgccgaattgatccgcaggctggcggatatcgagggcgtcgag
cgcatccgctacacgacgagccacccgcgcgatatggacgccgacctgatcgccgcccat
gccgaagttccccagttgatgccgttcctgcacttgccggtgcagtctggctccgaccgt
atgctggctgccatgaaccgcaagcatcgcgccgaggaatatttggacctcatcggccgc
ctgcgctccgcccgccccgaccttgccctgtcgagcgatttcatcgtcggctttcccggc
gaaaccgaccaggatgccgaggacaccctttcgctcatcagggcagtcggttttgctcag
gccttttctttcaaatacagcccccgccccggaaccccggcttcaacccacgagggtcag
gtccccgaagaggtcaaatccgaacgtctccagcgccttcaggcgctgctagacgaccag
caggcagactttaacacccaggccctcggcatgaccgttccggtgctgtttgaacgccgc
ggccgccagccgggtgaatttgtcggccggacaccctatctacagctcgttcacgtggcc
gccgagggcgacctcgtagggcgcacagcaaacgtggccgtgaccgatgcccgccgcgtc
agcctgtcgggtgtcatcgcggcagcataa
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