Hyphomicrobium sp. MC1: HYPMC_4786
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Entry
HYPMC_4786 CDS
T01557
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HYPMC_4786 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_4786 (mutS)
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HYPMC_4786 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_29
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CCB67994
LinkDB
All DBs
Position
complement(4590781..4593624)
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AA seq
947 aa
AA seq
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MSRTDEPRKSRRPESAPSAPAEVSQSSTTPATPEATPSMAQYLEIKAANPDSLLWYRMGD
FYELFFDDAVIASEALSIVLTKRGKHRGEDIPMCGVPVHRADEYLQRLIKQGHRVAVCEQ
LEDPAEARKRGAKAVVKRDVVRLVTPGTLTEEALLDAKARNYLTAVFLATPAELGLAFPD
ARVALASIDISTGEFEVSEVSGVDLSGELIRLASSEVLAADTLIGMETFTRTVDYSGGKT
TPIPSAYFDSASGARDLKECLGVADLAGFGSFSRSELAAVGAVLKYVDLTQMGRKPLLQA
PRRSGSAALFIDAASRASLELVKSTSSDKSSTLLAAMDRTITGGGARELQARIASPLIAP
APIEARLDAVSFLVDNRRLMDELRDCLRGTPDLARALPRLTFGRGGPRDLAAVRDAIDAA
SNAANMLNRAATPLPLPPELQSISTRLEAVPAALAHALKNALVDDPPLLRRDGGFIREGY
NSDLDAARALRNDSRRVMAELETRYIEETGIKTLRVRHNNILGFYIEVTQLNAKPLMSPP
LSERFRHRQTMANAVRFATSELLETEGQIASASERALNLEQEIFTSLTEDISTATDALGA
AAAALAELDVYTSLASLALEQGYVRPSIDETSAFEIRGGRHPVVQQALAKQGGTAFIEND
CILGRSGTPEAHPDENELPDARIWLVTGPNMAGKSTFLRQNALITVMAQMGSYVPARSAH
IGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATKRSLVVLDEIGRGTATFDGLS
IAWATVEYLHGVTKARALFATHYHELTALARRLDDIANVTMDVAEWHDTIVFLHKVKPGA
ADRSYGIQVAKLAGLPDPVVARARQVLARLEKADRRPKAGDESIDDLPLFSAARPKGASG
GASAGEEPSAVEKLLLNMHPDDLSPKAALEKLYELKALAENLKKTKP
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaccgacgagccgcgcaagagcaggcggccagaatcggcgccgtcggcgcct
gccgaagtgtcgcagagcagcactacgcccgcgacgcccgaggcaacgccctccatggcg
caatacctagaaatcaaagcggccaatcccgatagtctcctttggtatcggatgggcgat
ttttatgagcttttctttgacgatgcggtcatcgcctccgaggcgctttcgattgttctg
accaagcggggcaagcaccggggcgaagacatcccaatgtgcggcgtccccgtgcaccgc
gccgacgaatatctgcaaaggttgatcaagcaagggcaccgcgtcgcggtttgcgagcag
ctcgaagacccggccgaggcgcggaaacgcggcgctaaggccgtcgtcaaacgcgacgtc
gtccgcctcgtgactcccggcacgctgaccgaggaagccctgctcgacgccaaggcgcgc
aattacctgacggccgttttcctcgccaccccggctgagttgggtctcgcattcccggac
gcccgcgtcgcgctcgcctcgatcgatatttcgaccggcgaattcgaggtctcggaagtg
tcaggcgtcgatctttccggcgagctgatccgcctggcgtcgagcgaagttctcgccgcc
gacacgctcatcggcatggaaaccttcacacggacggtcgattattccggcggcaagacg
acgccgattccatccgcctatttcgatagcgcttccggcgcacgcgatctcaaagaatgc
cttggcgtcgccgatctcgccggtttcggttcgttttcacgcagcgaactcgccgccgtc
ggcgccgttctgaaatacgtcgacctgacgcagatggggcgaaagccgctgctgcaagcg
ccgcgccggtcggggagtgcggccctcttcatcgatgctgccagccgcgccagcctcgaa
ctcgtgaaatcgacgtcgagcgacaaatcctcgaccttgcttgccgcgatggaccgcacc
attaccggcggcggcgcacgtgaactgcaagcccgaattgcaagccccctgattgcgccc
gctcccatcgaagcccgtctcgacgccgtgtcctttctcgtcgacaaccggcgtctaatg
gacgaacttcgtgactgtctgcgcggcacgcccgatctcgcgcgtgccctgccgcgactg
acgttcggccgtggcggcccgcgcgatcttgccgccgtgcgcgacgccatagacgcagca
tccaacgccgcgaatatgctgaaccgcgccgcaaccccgctcccgttgccgcccgagctg
caatccatcagcacgcgtcttgaggccgttccggcagcccttgctcacgcgttgaagaat
gcccttgtcgacgatccgccgctgcttcgccgcgacggcggtttcatccgcgaaggctac
aattccgatctcgacgcggcacgcgctctgcgcaacgacagccgccgtgtcatggctgag
cttgagacccgctacatcgaagaaacgggcatcaagacgctccgcgtgcgccataacaat
attctcggtttctacattgaggtcacgcaacttaacgccaaaccgctgatgtcgccgccg
ctatccgagcgattccgtcaccgccagacgatggcaaatgcggtacgcttcgcgacctcc
gaactgctcgaaaccgaaggccagattgcatccgccagcgaacgcgcactcaatcttgag
caagaaatcttcacgtcgctgacggaagacatctcaaccgcaacagacgcgctcggcgca
gcggccgccgcgcttgccgaactcgatgtttacacgtctctggcatcgctcgcgctggaa
cagggctatgtgcgcccatccatagacgaaacgtccgcctttgaaattcgcggcggccgc
catcccgtcgtccagcaggcgctggcgaaacagggcgggaccgccttcatcgagaatgat
tgcattctcggccgcagcggcaccccagaagcacatcccgacgaaaacgaacttcccgat
gcccgcatctggctcgtcaccggtccgaacatggccggcaaatcgacgttcctgcgccag
aacgcgctcatcaccgtgatggcgcaaatgggctcttacgtgcccgcacgctcggctcac
atcggggtcgtcgaccggctgttctcgcgcgtcggcgcctccgacgacctggcgcgcggc
cgatcgaccttcatggtcgaaatggtcgaaacggcagcgatcctcaatcaggcgacgaaa
cgctcgctcgtcgtcctcgacgagatcggccgcggcaccgcaaccttcgatggtctttcg
attgcgtgggcgacagtcgaatatctccacggcgtaacgaaggcccgcgccctcttcgcc
acacactaccatgagctgaccgcactcgcccgccgtctcgacgacatcgccaacgtcacg
atggacgtcgccgaatggcacgacaccatcgttttcctgcacaaagtgaagcccggcgcg
gccgaccgttcctacggcatccaggtggcaaagctcgcaggccttcccgatccggtcgtc
gccagagcgcgccaggtgctcgcccgccttgaaaaagccgaccggcggcccaaagccggg
gacgaaagtattgatgatctgccgctattctctgcggcgcggcccaaaggcgcatcaggc
ggcgcatcggccggcgaagagccttctgccgttgaaaagctgctcttgaacatgcatcct
gatgatctctcgcccaaagcggcgctcgagaagctctatgaactcaaggctctggccgaa
aatttgaagaagacgaagccttga
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