Hyphomicrobium sp. MC1: HYPMC_4815
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Entry
HYPMC_4815 CDS
T01557
Symbol
ygjD
Name
(GenBank) O-sialoglycoprotein endopeptidase, with actin-like ATPase domain
KO
K25706
tRNA N6-adenosine threonylcarbamoyltransferase [EC:
2.3.1.234
]
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_4815 (ygjD)
Enzymes [BR:
hmc01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.234 N6-L-threonylcarbamoyladenine synthase
HYPMC_4815 (ygjD)
Transfer RNA biogenesis [BR:
hmc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HYPMC_4815 (ygjD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TsaD
HypF_C_2
Motif
Other DBs
NCBI-ProteinID:
CCB68023
LinkDB
All DBs
Position
complement(4622901..4624004)
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AA seq
367 aa
AA seq
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MSEPSDTAPSAALVLGLETSCDETAAAIVSRNAAGEGRILSNIVLSQFDKHAIYGGVVPE
IAARAHAESLDLLVKTALDKAGVTLGDLTGIAAATGPGLIGGLVVGATTGKALALATGRP
FVAINHLEAHALTVGLTDQVRPPYLMLLVSGGHTQLLLVEGVGQYRRLATTIDDALGEAF
DKTAKLLGLPMPGGPAVEKAAANGNGTRFDLPRPMKGRSDPHFSFAGLKTAVRHAAMQSA
PLSEQDVADLCASFQAAVCESVADRVRLAMRTCASHFPDAGQRPFVVAGGVAANKALRAT
LVDVARAHDFSFHAPPFELCGDNGAMIAWAGAERLARDLADPLDAPARPRWPLDAEAPKA
IGAGVKA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccttccgatactgcgccttctgccgctcttgttctcggccttgagacgagc
tgcgacgagacggcggccgccattgtgtcccgcaacgccgcgggagaagggcgtatcctg
tccaacatcgttctgtcgcagttcgacaagcacgcgatctacggcggcgtcgtaccggaa
attgccgcccgcgcccatgccgaaagcctcgatcttttggtcaagaccgccctcgataaa
gcgggcgtaacgctcggcgacctgaccggcattgcagcagccaccggccccggactgatc
ggcggcctcgtcgtcggcgccactacgggcaaggcgctggccctcgcaactggccgcccg
tttgttgcgatcaatcatctggaagcgcacgccctgacggtcggcctgaccgatcaggtt
cggccgccctatctgatgctgctggtctccggtggccatacgcaactgctgctcgtcgaa
ggcgtcggccagtatcgccggcttgcgacgaccatcgacgacgccctgggcgaagccttc
gacaaaacggcaaagctcctcggcctgccgatgcccggcggccccgccgtcgaaaaagcc
gcagcgaacggtaacggcacgcgtttcgaccttccgcgcccgatgaaaggccggagcgac
ccgcacttttcattcgccggtttgaaaacggcggtcagacatgcggccatgcaaagcgcg
ccgctatccgagcaagatgtcgccgatctctgcgcctcgtttcaggcggcagtgtgcgag
agcgtcgccgatcgcgtgcggctcgcgatgcgtacatgcgcgtcgcattttcctgacgcc
ggacagcgaccattcgtcgtcgccggtggcgtcgccgccaacaaggcgctgcgtgccacc
cttgtagatgtcgcccgagcgcacgacttctcgttccacgcaccgccgttcgaactttgc
ggcgacaacggtgccatgattgcttgggcaggcgccgaacgcttggcccgtgatcttgcc
gacccgctcgacgcgccggcaagaccgcgctggccgctcgacgccgaagcgcccaaagcc
atcggcgccggcgtcaaagcttaa
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