Hyphomicrobium sp. MC1: HYPMC_4890
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Entry
HYPMC_4890 CDS
T01557
Name
(GenBank) (di)nucleoside polyphosphate hydrolase (Nudix family)
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYPMC_4890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmc03019
]
HYPMC_4890
Messenger RNA biogenesis [BR:
hmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HYPMC_4890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
CCB68098
LinkDB
All DBs
Position
4698744..4699277
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AA seq
177 aa
AA seq
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MSKSGKPNIKPEDLPYRPCVGQMVINAEGLVWVGRRADIPGDAEGRGTWWQMPQGGIDAG
EEPAKAARRELFEETAMVSVEQIGELSRWVTYDLPPELIGVAWGGRYRGQKQIWFAYRFL
GTDSEINITPGEGLEPEFVEWRWASAHDLLDLIVPFKRAVYREVLREFAPLARPTRG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtcagggaaaccgaacatcaagcccgaggatctgccctatcggccgtgtgtg
gggcagatggtcatcaacgccgaagggctcgtttgggtaggccgccgcgccgacattccg
ggtgatgcggaagggcgcgggacctggtggcagatgccgcagggcggcatcgatgctggc
gaagagcccgccaaagcagcgaggcgcgaactgtttgaggaaacggcgatggtttccgtc
gaacagatcggggagctatcgcgctgggtcacttacgacttgccgcctgaattgatcggc
gtcgcctggggcggtcgctatcgcgggcagaagcagatatggtttgcctatcgcttcctg
ggaacggacagcgaaatcaacatcacgcccggcgaagggctggaacctgagttcgtggaa
tggcgttgggctagcgcgcatgaccttctcgaccttatcgttccattcaagcgcgcggtc
taccgcgaggttctgagggagttcgcgccgttagcgcgcccgacgcgcggctag
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