Hyphomicrobium sp. MC1: HYPMC_4912
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Entry
HYPMC_4912 CDS
T01557
Symbol
clpB
Name
(GenBank) protein disaggregation chaperone
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hmc03110
]
HYPMC_4912 (clpB)
Chaperones and folding catalysts [BR:
hmc03110
]
Heat shock proteins
HSP100
HYPMC_4912 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
nSTAND3
Sigma54_activat
AAA_16
TniB
AAA_7
IstB_IS21
AAA_18
AAA_3
NACHT
AAA_25
COG6_N
NBD_SMAX1
T2SSE
AAA_assoc_2
PduV-EutP
RNase_E_G
DUF4239
DUF6094
Fez1
AAA_13
FapA
DUF7310
Motif
Other DBs
NCBI-ProteinID:
CCB68120
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All DBs
Position
4722317..4724908
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AA seq
863 aa
AA seq
DB search
MNFERYTDRAKGFIQSAQSLALRENNQQVTPEHLLKILLDDPEGLASGLIQKASGDSRAA
LRAVEANLAKKPKVTGGSGQVYVSSELARVFDAVEKLADKASDKFVTAERLLLALALDTA
TDAGKILRDAGVTPDKINAAINDIRKGRTADSANAEQAYDALKRYARDLTEAAGSGKLDP
VIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVKGDVPESLKHKKLLS
LDMGALIAGAKYRGEFEERLKAVLSEVEAEGDIILFIDELHTIVGAGKTEGSMDAGNLLK
PALARGELHCVGATTLDEYRKHIEKDAALARRFQPIFVTEPTVEDTISILRGLKEKYELH
HGVRITDSALVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDAIDRDLM
QMMIEREALKKETDSASKDRLARLEKSIADLQEKSEAMTARWQAEKQKLGSAQKLKEELE
SLRNALEQAQRKGDLARAGELRYGKIPELEKKLADVESQERKGALVEEAVTPDQIAAVVS
RWTGVPVDKMLEGERDKLLKMEDALGKRVIGQKEAVIAVSTAVRRARAGLQDPNRPIGSF
MFLGPTGVGKTELTKALAGYLFDDDTALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGV
LTEAVRRRPYQIILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTLIVLTSNIG
AQYLVEQKEGEETEAVRDEVMAEVRARFRPEFLNRLDDIILFHRLQRADMTKIVDIQIGR
LQKLLADRKITIELDEQAKTWLANRGYDPAYGARPLKRVIQRNVQDPLAEQILAGGVKDG
DTVTVSVRDGALTINGWPIKAAA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgaacgctacacggaccgcgccaagggctttatccaatcggctcaatcgctg
gcactccgcgaaaacaatcaacaggtcacccccgaacatcttctgaaaattctgctcgat
gacccggagggtctagccagcggactgatccagaaggcgagcggggattcgcgcgccgca
ttgcgcgcggtcgaggcgaaccttgccaagaagccaaaggtcaccggcggctcgggacag
gtttacgtctcgtcggaactcgcacgcgtgttcgacgccgtcgagaaacttgccgacaag
gcgagcgacaagttcgtcaccgccgagcggctgcttttggcgctggcgctcgacaccgcg
acggacgcgggcaagatcctgcgcgacgccggtgtgacgcccgacaagatcaacgccgcc
atcaacgacatccgcaagggccgcacggccgacagcgccaacgccgagcaggcgtatgac
gctctgaagcgctatgcccgcgacctcaccgaagcggcaggctccggcaagctcgatccg
gttatcggccgcgacgaagagatccgccgcaccatccaggtgctgtcgcggcgcacgaag
aacaatcccgtgctgatcggcgaaccgggcgtcggcaagacggcgatcgcggaaggcctc
gcgctgcgcatcgtcaagggcgacgtgccggaaagcctgaagcataagaagctgctgtcg
ctcgatatgggcgccttgatcgcgggcgcgaagtatcgcggcgagttcgaggaacgcttg
aaagccgtgctgtccgaggtcgaggccgagggcgacatcattctgtttattgacgagctg
cataccatcgtcggcgccggcaagaccgaagggtcgatggatgcgggcaacctgttgaag
cctgcgctcgcgcgcggcgagcttcactgcgttggtgcgaccacgctggatgaataccgc
aagcacatcgaaaaggacgccgcgctcgcccgccgcttccagccgatattcgtaaccgaa
ccgacggtggaagatacgatctcgatcctgcgcggcttgaaagagaagtatgagctgcat
cacggcgtgcgcatcaccgacagcgcgctcgtctcggcggcgacgctttcgaaccgctac
atcaccgaccgctttctgcccgacaaggcgatcgaccttgtcgacgaggcggcgtcgcgt
ctgcgcatgcaagtcgattccaagccggaagagctcgacgccatcgaccgcgatctcatg
cagatgatgatcgagcgcgaagcgttgaaaaaggaaaccgactcggcatcgaaggatcgt
ctcgcgcggcttgagaaatccatcgccgatctgcaggaaaaatccgaggcgatgacggcg
cgctggcaggccgagaagcaaaagctcggctcggcgcagaagctgaaggaagagcttgag
agcctgcgcaacgcgctcgaacaggcgcagcgcaagggcgatctggcacgcgcgggcgag
cttcgctacggcaagatccccgagcttgagaagaagctcgccgacgtcgaatcccaagag
cgtaagggcgcgctggtcgaggaagccgtcacgccggatcagatcgcggccgtcgtgtcg
cgctggacgggcgttccggtcgacaagatgctcgagggcgaacgcgacaagcttctgaag
atggaagatgcgctgggcaagcgcgtcatcggtcagaaggaagcggtcatcgccgtttcg
acagctgtgcgtcgtgcgcgcgccgggcttcaggacccgaaccggccgatcggctcgttc
atgttcttaggaccgaccggcgtcggcaagaccgagctgacgaaggcgctcgcgggctat
ctcttcgacgacgacacggcgctcgtgcgcatcgacatgtcggagttcatggagaagcac
tcggtcgcccgtctcatcggcgcgcctccgggttatgtcggctacgaggaaggcggcgtg
ctgacggaagcggtgcggcggcgtccgtatcagatcatcctgttcgatgagatcgagaag
gcgcatccggatgtcttcaacgtgttgcttcaggttttggacgacggtcgcctgaccgac
ggccagggccgcacggtcgacttcaagaacacgttgatcgtgctgacgtcgaacatcggc
gcgcagtacctcgtcgagcagaaggaaggcgaggaaacggaagccgtgcgcgacgaagtc
atggctgaagttcgcgctcgcttccggcccgaattcctcaaccgtctcgacgacatcatc
ctgttccaccgcttgcagcgcgcggacatgacgaagatcgtcgatatccagatcgggcgt
ctgcagaagctcttggcggatcgcaagatcacgatcgagcttgatgagcaggcgaagacg
tggctcgcaaaccgcggctacgatccggcgtatggcgcgcggcctttgaagcgtgtcatc
cagcgcaacgtgcaggacccgctcgccgagcagatccttgcgggcggcgtgaaggacggc
gatacggtgacggtgtcggtgcgcgacggtgctctgacgatcaacggctggccgatcaaa
gccgcggcttga
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