Hyphomicrobium sp. MC1: HYPMC_4947
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Entry
HYPMC_4947 CDS
T01557
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM)
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYPMC_4947 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_4947 (mutM)
Enzymes [BR:
hmc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HYPMC_4947 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HYPMC_4947 (mutM)
DNA repair and recombination proteins [BR:
hmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYPMC_4947 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CCB68148
UniProt:
F8JHW2
LinkDB
All DBs
Position
4753636..4754514
Genome browser
AA seq
292 aa
AA seq
DB search
MPELPEVETVRRGLAPVLVGSRVARIDARRPDLRFPLPERFGERLAGQDIVGLERRAKYL
IATLSSGEDLVMHLGMTGRFSVIHKDFIDRPGDYIHDTGPDPAHDHVVLHLSDGTQVIYN
DPRRFGFMVMMPHAERPEHALFRKLGAEPLSAELTAEYLARRALGKKVNLKAFLMDQHIV
AGLGNIYVSEALFQAGLSPDRVAATLANRRGGIEKAEKLVVAIKDVLQRAIAAGGSTLRD
YRSADGKKGAFQERFAVYDREGGMCPTPGCGGEIRRAVHAGRATFYCRRCQR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccccgaggtcgaaaccgtgcggcgggggctggcgccggtgctggtcggc
agccgggtcgcgcggattgacgcgcggcggccggatttgcgttttccgctgccggaacgg
ttcggcgagcggctggcggggcaagacatcgtcgggctggagcggcgcgcgaaatatctg
attgcgacgctttcgagcggcgaggatctcgtcatgcatctgggcatgaccggacggttt
tccgtcatccataaggacttcatcgaccggccgggggactacatccacgatacggggcct
gatccggcgcacgatcatgttgtgctgcatctctctgacgggacgcaggtgatctacaac
gatcccaggcggttcggattcatggtcatgatgccgcatgcggagcggccggagcatgcg
ctgtttcgcaagctcggggcggagccattgagcgccgaactgacagccgaatatctggcg
cgacgcgcgctgggcaagaaggtcaacctcaaagcgtttctgatggaccagcacatcgtg
gcggggctcggcaacatctacgtgtctgaggcgctgtttcaggcggggctatcgcccgat
cgtgttgcggcaacgttggcgaaccgtcgcggaggcatcgagaaggccgagaagctcgtc
gttgcgatcaaggatgttctgcaacgggccattgcagcgggcggttcgacgctgcgcgat
taccgcagtgccgacggcaagaagggagcattccaggaacggtttgccgtttacgaccgg
gaaggcggcatgtgtcccactcctggatgcggcggcgaaatccgccgcgcggtgcatgcc
gggcgcgcgacgttttattgccggcggtgtcagcgctga
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