Vreelandella aquamarina SCSIO 43005: CTT34_05495
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Entry
CTT34_05495 CDS
T06424
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmd03016
]
CTT34_05495
Enzymes [BR:
hmd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CTT34_05495
Transfer RNA biogenesis [BR:
hmd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CTT34_05495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF1822
Motif
Other DBs
NCBI-ProteinID:
QHD51518
UniProt:
A0A857GQ90
LinkDB
All DBs
Position
complement(1121068..1123008)
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AA seq
646 aa
AA seq
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MLQNNSLLAQLKQQIRETTPRAEGVIKATEKGFGFLETDSGESYFVPPPAMKQVLHGDRV
EAVIHENGDKKSVEPEKLIEAGLDRFVARVQKREGRLAVVPDHPSIRNVLKARIKNSLDE
DSIADGDWVVARLVRHPLKENDRGFFTQIDELVAKADNPAVPWRVTLARHALEQECPDAG
SDWPLHDEGLTREDLTEQPYFTIDGEKTRDMDDALHVVARPEGGWQLSVAIADPTAYVEE
GHAADLEARVRAFTVYLPGQNVTMLPEQLADDLCSLWEGQERPALACTLNINADGSLGDY
RFFAANVKSHAKLVYERVSDWIEGQGDWAPADTIAEQLHALRELTEARTAWRNEHALVFK
DRPDYVFELDEAGNVLGIHTEDRRIANRMIEESMIAANACCADFLASHIGHGIFNVHRAF
EPEKAEAAQEFLATQDIEVAQEALTELAHYKELKRALESRDDAWLDARLRRFQGFTSMSA
QPGPHFGLGLPAYATWTSPIRKYGDMVNHRLIKRVLKGEQAPAEASQQLTEQLTERRRLN
RMAERDVKDWLYVRYLTPAAQNQDTFDAEIMAINRGGMRVRLIENGATAFVPAPLMHSDR
DKVVIDDKEGRIQIEGEERFKLGDSLRVSLTEAREETRSLVAKPAA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaacaactccctgcttgcccagctcaagcaacagatccgtgaaaccaccccg
cgcgctgaaggggtgatcaaagccacagaaaaaggctttggttttcttgaaactgatagc
ggcgaatcctatttcgtgccgccccccgccatgaaacaggtcctgcacggcgaccgtgtg
gaagccgtgattcacgagaacggtgataaaaagtcggttgagcctgaaaagcttattgaa
gccggtttagaccgcttcgttgctcgcgtgcaaaagcgcgaaggccgcctcgcggtggtg
ccggatcacccctcgattcgcaacgttctaaaagcacgcatcaaaaacagcctggatgaa
gactcgattgccgacggcgattgggtcgtggcgcgtttggtgcgtcacccgctaaaagag
aacgaccgcggcttcttcactcagattgatgagctagtggccaaagccgataacccggcc
gtgccgtggcgcgtgacgcttgctcgccacgcgctggagcaagagtgcccggatgccggc
agcgactggccgctgcacgatgaaggcctcacccgtgaagacctcaccgagcagccgtac
ttcacgatcgacggtgaaaaaacccgcgatatggatgacgcgctgcacgtagtggcacgc
ccggaaggcggctggcaactgagcgtggcgattgccgaccccaccgcttatgtggaagag
ggccacgctgctgacctggaagcccgcgtccgtgcatttaccgtgtacctgccgggccag
aacgtgaccatgctgcccgagcagttggcggatgatctttgctcgctgtgggaaggccaa
gagcgccctgccctagcctgcacgctgaacattaacgccgacggcagcctgggcgactac
cgcttcttcgcggccaacgtgaagtcccacgctaagctggtgtacgagcgcgtctctgac
tggattgaaggccaaggcgactgggcaccggcagatactattgccgagcagctacacgcc
ctgcgtgagctgaccgaagcccgtaccgcgtggcgtaacgagcacgcgctggtatttaaa
gatcgtcctgattacgtgttcgagctggatgaagcgggcaacgtgctggggattcatacc
gaagaccgccgcattgccaaccgcatgatcgaagagtcgatgattgctgccaacgcctgc
tgtgcggacttcctggccagccatatcggccacggcatcttcaacgtgcaccgcgctttc
gagccggaaaaagccgaagcggcacaagagttcctggcgactcaggacatcgaagtggct
caggaagcgctcaccgagcttgcccactataaagagctgaagcgtgcgcttgagagccgc
gacgacgcttggctggatgcgcgcctgcgccgtttccagggcttcaccagcatgtcagcc
cagcctggcccgcacttcggcctagggctgcccgcctacgccacctggacctcgccgatt
cgtaagtatggcgatatggtcaatcaccgcttgatcaagcgcgtgctgaagggcgagcag
gcaccggcagaagccagccagcagctcaccgagcagctcaccgagcgccgccgcctgaac
cgcatggccgagcgcgacgtgaaagattggctctacgtgcgctacctgactccagccgcg
cagaatcaggacacctttgacgcagagatcatggcgatcaaccgtggcggcatgcgggtt
cgcctgatcgagaacggcgcgacggcgttcgtgcccgcccccttgatgcacagcgaccgc
gataaagtggtcatcgatgacaaagagggccgcattcagatcgaaggcgaagagcgcttc
aagctgggcgatagcctgcgcgtatcgctcacggaagcccgcgaagagacgcgctcgctg
gttgccaaacccgctgcctaa
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