Vreelandella aquamarina SCSIO 43005: CTT34_06130
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Entry
CTT34_06130 CDS
T06424
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmd03016
]
CTT34_06130
Enzymes [BR:
hmd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CTT34_06130
Transfer RNA biogenesis [BR:
hmd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CTT34_06130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QHD49298
UniProt:
A0A857GJ41
LinkDB
All DBs
Position
complement(1252158..1253501)
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AA seq
447 aa
AA seq
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MAKKLFIKTHGCQMNEYDSSRMADLLGESHQLELTDNEKEADVILLNTCSIREKAQDKVY
HQLGRWKKLKDANPDLVIGVGGCVASQEGEALRKRAPYVDMIFGPQTLHRVPKMLDARNN
NQIAAVDVTFPEIEKFDHLPQPKSDGATAFVSVMEGCSKYCTFCVVPYTRGEEVSRPFEA
VMDEVIHLADQGVREINLLGQNVNAYRGENDDGDEIDLAELIACVAAVDGIDRIRFTTSH
PVEFTDSLVDAFAEIPELVSHLHLPVQSGSDRILSAMKRGHTAEEYIEKMERIRANRPDI
SFSSDFIIGFPGETEEDFEATMDLIHRIGFDHSFSFVYSARPGTPASGLADDTPESVKKQ
RLAILQERILQQAAQISRRMVGTTQRILVTGFSPKDPGQLSGRTENNRVVNFRAANPTEL
IGYFVDVEITEALPNSLRGELASGERY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagctcttcatcaaaacgcacggctgccaaatgaacgagtacgactcctcg
cgtatggcggacctactcggcgaatctcaccagctggagctcaccgataacgagaaggag
gcggatgtcatccttctcaacacctgctccattcgtgaaaaggcgcaggataaggtgtac
caccagctaggccgctggaaaaagctgaaagacgccaatcccgatctggtaattggtgtg
ggtggctgcgtggccagccaagagggtgaggcgctgcgcaaacgcgccccttacgtggac
atgatttttggcccgcaaacgctgcaccgcgtgccgaaaatgctcgacgcacgcaacaac
aaccaaattgcggcggtggacgtcacctttccggaaatcgagaagtttgaccacttgccc
cagcccaagtccgatggcgcgacggccttcgtctcggtcatggaaggctgctctaagtat
tgtacgttctgcgtggtgccctacacccgtggcgaagaggtctcgcgccccttcgaggcg
gtgatggatgaagtcatccacctggccgaccagggcgtgcgagagatcaacctgctgggc
cagaacgtgaacgcctaccgtggcgagaacgacgacggcgacgagatcgacctggccgag
ctgattgcctgcgtagccgccgtcgatggcattgaccgtattcgcttcaccacctcgcat
ccggtggagttcaccgacagcctcgtggacgcctttgccgagataccggagctggtcagc
cacctgcacctgccggtgcaatcaggctctgatcgcatccttagcgccatgaagcgcggg
cacacggcagaagagtacatcgagaagatggagcgtatccgcgcgaaccgtccggatatc
agcttctcctccgacttcatcatcggcttccccggtgaaacggaagaagatttcgaagcg
acgatggatctgatccatcgcatcggcttcgaccactcgttcagcttcgtttactcggcg
cgccccggcaccccggcgtctggcttggccgacgacacgccggaaagcgtgaagaagcag
cgcctcgccatcctgcaggagcgcattctgcagcaggcggcgcaaatcagtcgccgtatg
gtgggtaccacgcagcgcattctagtgaccgggttttcaccgaaagaccccggtcagctc
tctgggcgcaccgaaaacaaccgcgtagtgaacttccgcgcggccaacccgaccgagctg
atcggctatttcgtcgatgtcgagatcaccgaagcgctacccaactcgctgcgtggcgag
cttgcctctggcgagcgttattga
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