Vreelandella aquamarina SCSIO 43005: CTT34_06880
Help
Entry
CTT34_06880 CDS
T06424
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Pathway
hmd00071
Fatty acid degradation
hmd00280
Valine, leucine and isoleucine degradation
hmd00310
Lysine degradation
hmd00362
Benzoate degradation
hmd00380
Tryptophan metabolism
hmd00410
beta-Alanine metabolism
hmd00640
Propanoate metabolism
hmd00650
Butanoate metabolism
hmd00907
Pinene, camphor and geraniol degradation
hmd00930
Caprolactam degradation
hmd01100
Metabolic pathways
hmd01110
Biosynthesis of secondary metabolites
hmd01120
Microbial metabolism in diverse environments
hmd01200
Carbon metabolism
hmd01212
Fatty acid metabolism
Module
hmd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CTT34_06880
00650 Butanoate metabolism
CTT34_06880
09103 Lipid metabolism
00071 Fatty acid degradation
CTT34_06880
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CTT34_06880
00310 Lysine degradation
CTT34_06880
00380 Tryptophan metabolism
CTT34_06880
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CTT34_06880
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CTT34_06880
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CTT34_06880
00930 Caprolactam degradation
CTT34_06880
Enzymes [BR:
hmd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CTT34_06880
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CTT34_06880
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CTT34_06880
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CTT34_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QHD49432
UniProt:
A0A857GJI3
LinkDB
All DBs
Position
1415000..1417186
Genome browser
AA seq
728 aa
AA seq
DB search
MIYQGNAITVERRDTQGGNDIAMLTFDLKDESVNKLSSAVVAELGDAVKALQAENGLKGL
MIRSAKDAFIVGADITEFHSLFDKGEEYLVEMNLKVHDIFNAIEDLPFPTVTAINGLALG
GGCEVLLTTDFRVMSEKAKIGLPETKLGILPGWGGCVRLPRLIGADNAVEWIAGGTENRA
DAALKVGAVDAAVAHELLEEAALDILDRANAGELDYHARRDEKTSPLKLNAIEQMMAFET
AKGYVAGKAGPHYPAPVEAIKVIQKGAGETRARAQAIEAKSFAKLALSSVAFNLVGLFLN
DQVVKKKGSKYEKQAQPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKDDAIELGLKE
ARKLFAKQVERKKLTTEQMAEKLSNIRPTLSYGDFGNVDLVVEAVVENPNVKDAVLTEVE
GVVGENTILTSNTSTISINRLAKNLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVS
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQRVDKVMEKFGWPMG
PAYLLDVVGMDTAVHANDVMAEGFPDRMAREGKTAIQVMYDNQRLGQKNDKGFYAYEEDK
KGKPKKVSDEQAYALVKEVVKEQKEFSDEDIIARMMVPLCLETVRCLEDGIVDTPAEADM
ALIYGIGFPPFRGGALRYIDALGVAEFVALADRLAEELGPLYAPTEKLRAMAKNNEQFYA
GTTANAQA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccatcacggtggagcggcgtgacacccagggtggcaatgac
atcgcaatgctcactttcgatttgaaagatgagtccgtcaataagctatccagcgccgtc
gtggctgaactcggcgacgccgtcaaagccctccaagccgaaaacggtttgaaagggttg
atgattcgcagtgccaaagacgccttcatcgtcggtgctgacattaccgaattccatagc
ctgttcgataagggtgaagagtacttggtagagatgaacctcaaggttcacgatattttc
aacgccatcgaagacctgcctttccccaccgtgacggcgatcaatggcctggcgcttggc
ggtggctgcgaagttctgctgaccaccgatttccgcgtgatgagtgagaaagccaaaatt
ggcttaccggaaaccaagctgggtatcctgccgggctggggtggttgcgtacgtctgccg
cgtctgatcggtgccgataatgccgtcgagtggattgccggtggtaccgaaaatcgcgct
gacgccgcgctaaaagtaggcgcagtagacgcggccgttgctcatgagctgctggaagaa
gcggcgctggacattcttgaccgcgccaatgcaggcgagttggactatcacgcccgtcgc
gacgagaaaacatcaccgctcaagctcaatgccatcgagcagatgatggcgttcgaaacc
gctaaagggtacgtggctggcaaagcaggcccgcactatcccgccccggtggaagcgatc
aaagtgatccaaaaaggcgccggtgaaacccgcgcccgcgctcaggcgatcgaagccaaa
tcgttcgccaagctggcgctaagcagcgttgcctttaacttggtcggcctgttcctgaac
gaccaggtcgttaagaagaagggcagcaagtacgaaaagcaggcccagccggtcaaacag
accgccgtgttgggtgccggcatcatggggggcggtatcgcctaccaaagtgccagcaaa
ggcacgcccatcctaatgaaagacatcaaggatgacgccatcgagctcggcctcaaagag
gcacgcaagctgtttgccaagcaggtagagcgtaaaaagctcactaccgagcagatggcc
gagaaactttccaacatccgcccgacgctctcctacggcgatttcggtaacgtcgatttg
gtcgtggaagccgtggtcgagaaccccaacgtcaaagatgccgtgttgaccgaagtggaa
ggcgtggtaggtgagaacacgattctgacctccaatacgtcgaccatttcgatcaaccgc
ctggccaaaaacctgaagcgcccggaaaatttctgcggcatgcacttcttcaacccggtt
catcgcatgccgctggtcgaggtcatccgtggtgagaaaacctcggacgccgccgtgtca
gcgaccgtcgcctacgcccgcgccatgggtaaaacccccatcgtggtgaatgactgccca
gggtttctggtcaaccgcgtactgttcccttacttcggtggctttagcttcctggtcgag
cagggcgccgacttccagcgcgtggataaagtcatggagaagtttggctggcccatgggc
ccggcctatctgctggatgtcgtcggcatggataccgccgtgcacgccaacgacgtgatg
gccgaaggcttcccggatcgtatggcacgtgaaggcaaaacggcgattcaagtgatgtac
gacaaccagcgcctgggccagaagaacgacaaaggcttctacgcttacgaagaagataag
aagggtaagccgaagaaggtcagcgacgagcaggcttacgcgttagtaaaagaagtggtg
aaagagcagaaagagttttcggatgaagacatcatcgctcgcatgatggtgccgctgtgc
ctggagaccgtacgctgcctggaagatggcattgtcgatacgccagcagaagccgatatg
gcgctgatttacggcattggcttccctcccttccgtggcggtgcgctgcgctacatcgac
gcgctgggcgtagccgagtttgttgcgctggccgaccgtttggccgaagagctggggccg
ctgtacgcgcccaccgagaagctgcgcgccatggccaagaacaacgagcagttctacgct
ggcaccacggcaaacgctcaggcctaa
DBGET
integrated database retrieval system
