Vreelandella aquamarina SCSIO 43005: CTT34_07750
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Entry
CTT34_07750 CDS
T06424
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmd03032
]
CTT34_07750
03400 DNA repair and recombination proteins [BR:
hmd03400
]
CTT34_07750
Enzymes [BR:
hmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CTT34_07750
DNA replication proteins [BR:
hmd03032
]
Prokaryotic type
DNA Topoisomerases
CTT34_07750
DNA repair and recombination proteins [BR:
hmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CTT34_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_Ribbon_TF
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QHD49590
UniProt:
A0A857GK03
LinkDB
All DBs
Position
1606119..1608746
Genome browser
AA seq
875 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFIVKSSVGHIRDLPTSGSGKAASDPKERARQAAATR
KMSAEEKAEYKKRKAHDQLIRRMGIDPDNGWEAHYEVLPGKEKVVAELKKLAEKADAVYL
ATDLDREGEAIAWHLRETIGGDDSRYKRVVFNEITKNAIQDAFKAPGALNLPRVEAQQAR
RFLDRVVGFMLSPLLWAKIARGLSAGRVQSVAVRLIVEREREIRAFIPEEFWDVHADLVS
PDGELVRFALARQDGKPFRPTSEKETMERIAQLRKAKLSITSREDKPTSSKPTAPFITST
LQQAASGRLGFSVKKTMTMAQRLYEAGYITYMRTDSTNLSKDAVESVRSFIGDEYGARYL
PESPNRYSSKESAQEAHEAIRPSSVERKASDLSGMERDAERLYELIWRQFVACQMTPAEY
LSSTLSVEVDGYELRAKGRVLKFDGYTRVMKPTGKNEDQSLPDLPTGTSMRLEALDPQQH
FTKPPARYTEASLVKELEKQGIGRPSTYASIISTIQDRGYVKLESRRFYAEKLGDIVTER
LKESFPDLMDYSFTARMEDSLDEVAEGERNWQALLDAFYDEFRMELMKAESEEGMRPNQP
VPTDIDCPSCGRKMQIRTASTGVFLGCSGYNLPPKERCKTTIDLIPGEEAVAEDAGEEAE
TDALRAKRRCPKCGTAMDNYLIDETRKLHICGNSPDCDGYEIESGKFKIKGYDGPLIECD
KCGADMQLKSGRFGKYFGCTNSECKNTRKLLRSGEVAPPKMDPIPMPELACQKVEDHYVL
RDGASGLFLAASKFPKNRETRPPLVKELKAHADELPEKYHFILKAPSEDPDGRPAQIRYS
RKNKEQYVMTDEEGKATGWKATFEGGKWHVEDKRK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcactggtcatcgtcgaatcgcctgcgaaagcgaagacgatcaataagtat
ctcggcaacgatttcatcgtcaagtcgagcgtaggtcacatccgtgacctgccgaccagc
ggctcaggtaaggcagcctccgaccctaaggagcgcgctcgccaagccgcggcaacgcgt
aagatgtcggcggaagagaaggcagagtataaaaagcgcaaggcccacgaccagttgatt
cggcgcatgggtatcgaccccgataatggctgggaagcccactacgaggtgctgcccggt
aaagagaaagtcgtcgccgagctcaaaaagctcgccgaaaaagccgatgccgtctacctt
gcgacggatttggaccgcgaaggggaagccattgcgtggcaccttcgcgagaccattggg
ggcgacgacagccgctacaagcgcgtggtgttcaatgagatcaccaaaaatgccattcag
gacgccttcaaagccccaggtgcgctgaacctgccccgcgtagaggcccagcaagcacgc
cgctttctcgaccgcgtcgtgggcttcatgctctcccccttattgtgggcaaaaatcgct
cgtgggctgtccgccgggcgcgtacagtcggtggcagttcgcctgatcgtcgagcgcgag
cgcgagattcgtgcgttcattcccgaggagttctgggatgtccacgcggatctcgtctct
cctgacggtgagctagtgcggtttgctctggcaaggcaggatggcaagccgttccgcccg
acctccgaaaaagagaccatggagcgcatcgcgcagctgcgcaaagccaagctgtcgatc
acctcgcgagaggacaaaccgaccagttccaagcccaccgcgccgttcatcacctcgacg
cttcagcaggcggccagtggtcggttagggttttcggtgaagaaaaccatgaccatggcc
cagcgtctctacgaagcgggctacatcacctatatgcgtaccgactccaccaacctctcg
aaagatgcggtggagagcgttcgttcgtttattggtgatgagtatggggcgcgctatctg
cccgagtcgcccaaccgttacagcagcaaagagagtgcccaggaggcccacgaggccatc
cgcccctcaagcgtcgaacgcaaagcgtctgacctctctgggatggagcgcgacgcagaa
cgcctttacgagcttatttggcgacaattcgttgcgtgtcagatgacgcctgccgaatac
ctgtccagcacgctcagcgtggaagtggatggctacgagctgcgcgccaaaggccgcgtg
ctgaaattcgacggttatacacgggtgatgaagcccaccggcaaaaacgaagatcagagc
ctgcccgatctgccaaccggcacgagcatgcgtcttgaagccctcgacccacagcagcac
ttcaccaagccgccggcgcggtataccgaagccagcctggtcaaagagctagagaagcag
ggcattgggcgtccttccacgtacgcgtcgatcatctcgaccattcaagaccgtggctat
gtaaagctggagagccgccgcttctacgccgagaaactcggtgacatcgttaccgagcgg
ctgaaagagtctttccctgacctgatggattactcctttaccgcgcggatggaagacagc
ctcgatgaagtggccgaaggcgaacgcaactggcaggcgctgctcgatgcgttctacgac
gagttccgcatggagttgatgaaggccgagagcgaggagggcatgcgccccaaccagccg
gtgcctacggatatcgactgcccgagctgtgggcgaaaaatgcagatccgtaccgcctcg
accggcgtcttcctagggtgcagcggctacaatttgccgcccaaagagcgctgcaagacc
actatcgacctgattcctggtgaggaagccgtcgcggaagacgcgggcgaagaggccgaa
accgatgcgctacgcgctaagcgtcgctgcccgaaatgcggcacggccatggataactac
ctgatcgatgaaacccgtaagctgcacatctgtggtaacagcccagattgcgatggctat
gagatcgaaagcggtaagttcaagatcaaaggctacgacggtccgctcatcgagtgtgat
aagtgcggcgccgacatgcagcttaaatcgggtcgcttcggcaagtactttggctgtacc
aacagcgagtgtaaaaatacccgcaaactgttgcgcagtggtgaggtcgcgccgccgaag
atggacccgatcccgatgcctgaactggcctgccaaaaggtggaagatcactacgtgctg
cgcgatggggcaagcggtctgtttctagcggcgagcaagttccccaaaaatcgtgagacg
cgtccgccgttggtcaaggagctcaaggcacatgccgatgagctaccagagaagtatcac
tttattcttaaagcgccgagcgaagatccggatggtcgtccagcgcaaattcgctattcg
cgtaaaaacaaagagcagtacgtgatgaccgatgaagagggtaaagcaaccggctggaaa
gcgaccttcgaaggtggcaaatggcacgtggaggataagcgtaagtga
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