Vreelandella aquamarina SCSIO 43005: CTT34_08135
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Entry
CTT34_08135 CDS
T06424
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Pathway
hmd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CTT34_08135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmd03400
]
CTT34_08135
Enzymes [BR:
hmd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CTT34_08135
DNA repair and recombination proteins [BR:
hmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CTT34_08135
Prokaryotic type
CTT34_08135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QHD49661
LinkDB
All DBs
Position
1686779..1687462
Genome browser
AA seq
227 aa
AA seq
DB search
MANPLPDDWSQWLGQEFQAEYMSALKAFLADEKAAKKVIYPHSSNWFRAFELTPLASVKV
VILGQDPYHGPNQAHGLCFSVQPGVPVPPSLVNIYKELASDVGFTPVRHGFLESWAKQGV
LLLNTALTVEQGNAASHRGKGWEHFTDRTIETVSRHAEPSVFLLWGSHARQKKSLIDTSR
HLMLESPHPSPLSAHRGFFGNRHFSKANQFLEAQGRAPIAWQLPETP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggctaacccgctacccgatgattggagccagtggctagggcaagagtttcaggcggag
tacatgtccgccctgaaggcgtttttggccgatgaaaaagcggccaagaaagttatctac
ccgcactcgtcgaactggtttcgtgctttcgagcttacgcctctcgcttcggtgaaagtg
gtgattctggggcaagacccctatcacgggcctaaccaagcgcacgggctctgcttttcg
gtacagccgggggtgccggtgcccccgtcgctcgtcaacatttataaggagttggcgagc
gacgtgggttttacgccggtgcgtcacggctttttggagtcgtgggccaagcaaggggtg
ctgctattgaacacggcgctgacggtagagcagggcaatgccgcgtcgcatcgtggtaaa
gggtgggagcatttcaccgatcggaccattgagaccgtaagccgacacgccgaacctagt
gtgtttcttctgtggggtagccatgcgcgtcaaaagaagtcgctgatcgatacttctcgt
catttgatgttggagtcgccacacccctcgccgctatcggctcaccgcggcttttttggc
aatcgtcacttttccaaggcgaatcagttcttggaagcacaggggcgtgcaccaattgcg
tggcaattaccggaaaccccttaa
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