Vreelandella aquamarina SCSIO 43005: CTT34_12230
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Entry
CTT34_12230 CDS
T06424
Name
(GenBank) ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Pathway
hmd00540
Lipopolysaccharide biosynthesis
hmd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CTT34_12230
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hmd01005
]
CTT34_12230
Enzymes [BR:
hmd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
CTT34_12230
Lipopolysaccharide biosynthesis proteins [BR:
hmd01005
]
Core region
CTT34_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
QHD50399
UniProt:
A0A857GMA2
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All DBs
Position
complement(2540403..2541662)
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AA seq
419 aa
AA seq
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MTYPPHAATNRAAELPSQLSSMAVFLLTAVCLILPSGYSIGAVILFLAGCWLLITRRLPA
LNKHDFWVIAALVAYALVSMLEAWWDGQGSRGFDKPSRFILAIPALLWVLRYPPKLAYLW
SGIALGGISAGAWGGWQKLVEGVGRAQGHTHVIQFGNLSMLLGVLCMAGLGWAVIQRYRG
VWVVLLLAGAAGGVLGSLFSGSRGGWVGFPIVLLVLYRAYGTQLSTKLKAAALAAVVLGG
ITVYAVPQIGVQERVHQAFSDVALYASGENRSTSVGSRFEMWRGASQLIQEKPLTGWGSN
GYAQAMADFGEAGVISAEAAQYGHAHNEFIDAFAKRGVVGLAVLLALYLVPMRLFARHLQ
ANHLATRAVATAGVLLPVTFMDFGLTQVFLEHNSGVMMYAFMLAVLWGIYAQQISHKTN
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacgtaccctccccacgctgccacgaacagagccgccgagctgcccagtcagctctca
agtatggcggtttttcttctgacggccgtctgcctcatccttcctagtggctactccatc
ggtgcagttattctctttctggctggttgctggctacttatcacccgtcgcctgccagcg
ctgaacaagcacgatttttgggtcatcgccgcgctggtggcctacgcgttggtcagcatg
ctggaggcctggtgggatggccaaggcagccgagggttcgataagcccagccgtttcatc
ctggctattcccgccctgctatgggtgctgcggtacccacccaagctcgcctatttgtgg
agtggcatagcgctgggtggcatcagtgcgggtgcttggggtggctggcaaaagctcgtc
gaaggcgttgggcgcgcccagggccatacccatgtcatccagtttggcaatctcagcatg
ctgctaggcgtgttgtgcatggcgggcttgggatgggccgtcattcagcgctatcgtggt
gtttgggtagtgctactactcgctggggcggcaggcggtgtgttggggtcgcttttctca
ggtagccgtggcggttgggtagggtttcctatcgtgctactggtgctctaccgggcttat
ggtacccagctttcgaccaaactgaaggcggccgcgctagcggctgtcgtgttgggtgga
ataacggtgtatgccgtaccgcaaatcggtgtgcaagagcgtgttcatcaagcctttagt
gatgtggcgctgtacgcttccggcgaaaaccgctcgacctcggtaggctcacggttcgaa
atgtggcgcggtgcttcccagctcattcaagaaaaacccctgaccggctgggggagcaat
ggttacgcccaagcaatggccgacttcggcgaggcgggggttatcagcgccgaagccgcc
cagtatgggcatgcccataacgagttcatcgatgcgttcgccaagcggggggtagtaggg
ctggccgtgctgctggcgctttatctcgtgcccatgcgtctgtttgcacgccacttgcag
gctaaccacctagccacgcgagccgtagccactgcaggggtgctgcttcccgtgacgttc
atggactttggtttgactcaagtgttcttggagcacaacagcggcgtgatgatgtatgcc
ttcatgctggcagtgctttggggcatttatgcacagcaaatatctcataaaactaactaa
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