Vreelandella aquamarina SCSIO 43005: CTT34_12985
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Entry
CTT34_12985 CDS
T06424
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Pathway
hmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CTT34_12985 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmd03400
]
CTT34_12985 (recC)
Enzymes [BR:
hmd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CTT34_12985 (recC)
DNA repair and recombination proteins [BR:
hmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTT34_12985 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QHD50533
UniProt:
A0A857GML9
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All DBs
Position
2707351..2710905
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AA seq
1184 aa
AA seq
DB search
MPANALFSPTSLPPGFMVVHANRLEDLRGLAVEWMRRQPLGPLENETILVQSNGIGQWLK
LALAEDPKNGGAGIAAALEVMLPARFLWQAYRTVLTHVSQNADAVPETSPFDKSRLVWRL
LRLLPTLAGQPVFEPLAQFLEIDRDQRKHYQLAERLADLFDQYQVYRADWLDAWANGHDV
LITARGEHRPLEEHQRWQPALWRILRDDVAATQGDAGLNSSRAQVHQRFLKATEHLEGQD
CPPGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQFYWADIIEHKDLLRAQR
YRQRRKTGMPEALDVLGTGDADDALHLHAQPLLAAWGKQGRDYLRLLDEHDDAGNYQTLF
EQQALRIDMFEPFSGEDRHCLLSQLQDDIRELRPVAETQGHWPALPAADDSIVFHIAHGP
QREVEILHDQLLAAFSADPYLRPRDIIVMVPDIDRYAPHIEAVFGQLPTDDPRHIPYTLS
DQASRHRLPLMIALEKLLRLPELRLSVSDLLDLLDVPALRQRFGLEERDLPVLERWMEGA
GIRWGLNAKQRQRLELPGGLSQNTWAFGLRRLLLGYTVGDGHAWQGIEPFDDIGGLEAGL
AGPLATLLEKLEATWESFCQPTDAATWVARLRELLETFFLTDDAQESIMLTKLESGLQQM
LESSREAELNDPLPLSMVREHWLAQIDEHSLSQRFLAGAVNFATLMPMRAIPFKRVCLLG
MNDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARDQLYVSWVGRSQIDN
TPLPPSVLVGQLRDHLEAGWQTENGAPLLETLTTEHPLQPFSRAYFNSPASRLFTYAHEW
REVHAPRTPPAASRTLPAPENAPTSLSLGQLGSFLREPVRSFFNTRLGVYFEQEAIAELD
AEPFALDGLQNWQLQDQLIAAQRHAVDNGQPRMEALHDALERFQGQGVLAMGAFGERMRA
ALAEPMEALFNAYEAALDAWPHLLPDTMIHFEAHGLTLEEPLGELRQDEAGHRCRLLLLS
SSLISQGSGRGQYRWSHLLRPWVAHLAGNLDGPMTTQLLSKAGHVTLAPVDAETARQHLE
TQLAAWQAGLETPLPLAPQAAFAWLSKQGTPDMAQEKGRDSDAYAAAETAYEGGRYQTGE
VAQSAYLNHQWPRFERLFVEQANGHTFATLTEALYAPLHQAVKG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccaatgctttgttctcccccacttcgctcccacccggttttatggtggtacat
gctaaccgcttggaagatttacgcggtttggcggtggagtggatgcgccgccagccgttg
gggccgttggagaacgaaaccattctggtgcagagcaacggtattgggcagtggctaaaa
ctggcgttggcggaagaccctaagaacggcggcgcgggcattgcggcggcgctagaggtg
atgctgcccgcgcggtttctatggcaggcctaccgcacggtgctcactcacgtgtcgcaa
aacgccgatgccgtgccggaaacctcgccgttcgataaatcgcgcttggtatggcggctg
ctgcgcctgctgcctaccctggctgggcagccggtattcgagccgctggcgcagtttcta
gaaattgaccgcgaccagcgcaagcactaccaactggccgagcggctggcggatctgttt
gaccagtatcaggtctaccgcgccgactggctggacgcctgggctaacggccacgatgtg
ctaattaccgccagaggcgagcaccgccctttggaagagcatcagcgctggcagcccgcg
ctctggcgcatcctgcgggacgatgtggccgccacccaaggcgatgccggattgaacagc
agccgcgcccaggttcaccagcgtttcttgaaggccaccgagcacctggaaggccaagac
tgcccgccggggctgcctcgtcggctgatcatcttcggtatttcatcgctgccccagcaa
accctggaagcgctggcggcgctctcccgctgctgccaaatcgtgctgtgcgttcacaac
ccctgccagttctactgggcggatatcatcgagcacaaagacctgctgcgcgcccagcgc
taccgccagcggcgcaaaaccggcatgcccgaagcgctggatgtactgggcaccggcgat
gccgatgacgccctgcacctgcacgcccagccgctgctagccgcctggggcaagcagggc
cgcgactacctgcgcctgctcgatgagcacgacgacgcaggcaactaccaaactctattc
gagcagcaagcactgcgcatcgatatgttcgagccgttcagcggcgaggatcgccactgc
ctgctcagccagctgcaagacgacatccgcgagctgcgcccggtggcggaaacgcaaggc
cactggcccgcactgcccgctgccgatgactccatcgtgttccatatcgcccacggcccc
cagcgggaagtggagattctccacgaccagctgctggccgccttcagcgccgacccgtat
ttgcgcccacgggacatcatcgtcatggtgccggatatcgaccgctacgcgccgcacatc
gaagcggtgtttggccagctgcccaccgacgacccgaggcacattccctacacgctctcc
gaccaggccagccgccaccgcctgccgctgatgattgccctggaaaagctgctaaggctg
ccggagctgcgcctgtcggtgagcgatttactcgacctgctggatgtccccgccctgcgc
cagcgcttcggcctagaagagcgtgacctgccggtgctagagcgctggatggaaggcgcg
ggcatccgctgggggctcaacgccaagcagcgccagcggctggaactacccggcgggctg
agccaaaacacctgggcattcggcttgcgccgcctgctgctgggctataccgtgggcgac
ggccacgcgtggcaaggcatcgaaccgtttgatgatatcggcgggctggaggcgggcttg
gctgggccgctggcgacgctgctggagaagctcgaagccacctgggagagcttctgccaa
cccaccgatgccgctacttgggttgcgcggctacgggagctgctggaaactttctttctt
accgacgatgcccaagagagcatcatgctcaccaagctagaaagcggcttgcagcagatg
ctggaaagcagccgggaagccgaactcaacgacccgcttccgctctctatggtgcgggag
cactggctagcgcagatcgatgaacacagcctttcccagcgcttcttggccggggcggtc
aacttcgccacgctgatgcccatgcgtgccattcccttcaagcgggtgtgcctgctgggc
atgaacgacggcgagtacccccgctcccagccgccgctggatttcgacctaatgggcagc
gactaccgccccggcgaccgctcccgccgggaagacgaccgctacctgtttcttgaagcg
ctgctctccgcccgcgaccagctctacgtgagctgggtcggccgcagccagatcgacaat
acgccgctgccaccctcggtgctggtgggccagctgcgcgaccacttggaagccggctgg
caaacggaaaacggcgcgccgctgctggaaacactcaccaccgagcatccgctgcagcct
tttagccgcgcttacttcaacagcccagcaagccggctgttcacctacgcccacgaatgg
cgcgaggtgcacgccccgcgcacgccacccgccgctagccgcacgctgccagcgccggaa
aacgcccccaccagcctctcgcttgggcagctgggcagctttctgcgcgagccggtgcgc
agcttcttcaatactcgcttgggggtctatttcgagcaggaagccatcgccgagctggac
gccgagccattcgccctggatggcctgcaaaactggcagctccaagaccagctgattgcc
gcccagcgccacgcggtggataacggccagccgcgcatggaagcattgcatgacgcgttg
gagcgctttcaaggccaaggcgtgctagccatgggcgcgttcggcgaacgcatgcgcgcg
gcactcgctgaacccatggaggcgcttttcaacgcctacgaagcagcgctagacgcatgg
ccgcatctcctgcccgacaccatgattcacttcgaagcccatggcctcacgctggaagag
cccttgggtgagctgcgccaggacgaagcaggccaccgctgccgcctgctgctgctcagt
agcagcctgattagccaaggcagcgggcgcggccagtaccgctggagccacctgctgcgc
ccttgggttgcgcacctagcgggcaacctggatggcccgatgacgacgcaactgctctcc
aaagcggggcatgtcacgttagcgccggtggatgccgagaccgcccgccagcatttagaa
acccagctagccgcgtggcaagcgggcctagaaaccccgctgccgctcgcaccgcaagcc
gcgtttgcttggctaagtaagcaaggcacgccggacatggcgcaagaaaaaggccgagac
agcgacgcctacgccgccgccgaaaccgcctatgaaggcggccgctaccaaaccggtgaa
gtggcccaaagcgcgtatttaaaccaccagtggccccgcttcgagcggctattcgtagag
caagccaacgggcacacctttgctacgctcacagaagcgctctacgcgccgcttcaccag
gcggtcaaagggtaa
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