KEGG   Vreelandella aquamarina SCSIO 43005: CTT34_14010
Entry
CTT34_14010       CDS       T06424                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hmd  Vreelandella aquamarina SCSIO 43005
Pathway
hmd03030  DNA replication
hmd03430  Mismatch repair
hmd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CTT34_14010
   03430 Mismatch repair
    CTT34_14010
   03440 Homologous recombination
    CTT34_14010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmd03032]
    CTT34_14010
   03400 DNA repair and recombination proteins [BR:hmd03400]
    CTT34_14010
Enzymes [BR:hmd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CTT34_14010
DNA replication proteins [BR:hmd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CTT34_14010
DNA repair and recombination proteins [BR:hmd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CTT34_14010
SSDB
Motif
Pfam: RNase_T Rv2179c-like DUF8031 RNase_H_2
Other DBs
NCBI-ProteinID: QHD50718
UniProt: A0A857GN06
LinkDB
Position
complement(2935907..2936632)
AA seq 241 aa
MHGIRPRQKVTQADWQGYMAARAERAQDEMLKRFFDTPMPDPDTPLSEVPMVALDMETTG
LDERRHAIVSIGVVPFTLGRIPMAQRRYWVVKPSRPLDETSIAYHHITHSEIADAPDLDD
VLDELLTVLAGRIVVVHFRNIERPFLDAAVKARRGEGVLFPMIDTMSLEARLHRQTLWAR
FRRWLGRPPVSIRLNASRERYGLPAYQGHHALVDALATAELLQAQIANRYTPDTPLKALW
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcacggcatacggccgcgccaaaaagtcacccaggccgactggcagggctatatggcc
gcccgggccgagcgggcccaagacgagatgttgaagcgctttttcgacacgcccatgccc
gacccggatacccccttgtcggaagtgcccatggtggcgctggatatggaaaccactggg
ctcgacgagcgccgccatgcgattgtcagtattggcgtcgtaccatttacgttggggcgt
attcccatggcccaacgccgttactgggtcgtgaagccatcccggccgctggacgagacg
tcgattgcttatcaccacatcacgcactcggagatcgccgatgcgccagacctcgatgac
gtgttggatgaactgttgacggtgctggcagggcgtatcgtggtggttcactttcgaaac
atcgaacgcccctttctcgatgcggcagtgaaggcgcgccggggcgaaggggtgctgttt
ccaatgatcgataccatgtcgctggaagcgcgactgcatcgtcaaactctgtgggctcgt
ttccgccgttggttaggtcggccgccggtatcgattcgcctcaacgccagtcgtgagcgc
tacggtttgcctgcctatcaagggcaccatgcgctggtcgacgcgctggccaccgcggag
cttttgcaggcgcaaatcgccaatcgctatacgccagacacgcccttaaaagcgctgtgg
tgttaa

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