Halomonas meridiana: CTT34_14175
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Entry
CTT34_14175 CDS
T06424
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hmd
Halomonas meridiana
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmd03021
]
CTT34_14175
Transcription machinery [BR:
hmd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CTT34_14175
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QHD51607
UniProt:
A0A857GS16
LinkDB
All DBs
Position
complement(2970624..2971598)
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AA seq
324 aa
AA seq
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MSMLEKDLQEIDLDEVEEALDDADDDVTAEEDAFEKALGREDRQSTQSLDATQIYLNEIG
FSPLLTPEEEVYYGRLARKGDALGRSRMIESNLRLVVKIARRYLNRGLTLLDLIEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARELT
QKLDHEATAEEIAEHLDKPVETVKKMLGLNERVSSVDYPMGGDSDKPLIDTLTDDEVLGP
EACLVDGDVREHVDHWLDELSEKQREVVVRRFGLRGHEAATLEEVGAEIGLTRERVRQIQ
VEALKKLRRSLEKQGLSLDAIFES
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgctggagaaggacctacaggagattgacctggatgaagttgaggaggcgttg
gacgacgccgacgacgacgttacggccgaggaggatgcgtttgaaaaagcgctgggccgt
gaagaccgtcaatcgactcaaagcttggatgcgacacagatctaccttaacgagatcggc
ttttctccgctgctgacgccggaagaagaagtgtattacggccgcctggcacgcaagggc
gatgcgcttggtcgctccaggatgatcgaatctaacctgcgcctggtggtcaagattgcc
agacgctacctgaaccgaggcttaacgctgctcgatttgatcgaggaggggaatcttggt
ttgatccgtgccgtcgagaagttcgaccccgagcgggggtttcgcttctctacgtatgcc
acctggtggattcgtcagaccattgagcgtgcgctaatgaatcagacgcgcaccattcgc
ctgcccattcacgtggtaaaagagctcaatatctatctgcgcgctgctcgtgagctgacg
caaaagttggatcacgaagcgaccgccgaggagatcgccgagcatctcgacaagccggtc
gagacggtcaagaagatgctggggctcaacgaacgagtgtcgtcggtggattaccccatg
ggcggtgacagcgacaagccgttgatcgatacgctcactgacgacgaagtcctcggtccg
gaagcgtgtttggtggatggcgacgtgcgtgagcacgtggaccattggctggatgagctg
agcgaaaaacagcgcgaggtcgtggtacgccgctttggtctacgcggccacgaagccgcg
acgctggaagaggttggcgcggagattggtctcacccgtgagcgggtgcgccaaattcag
gtagaagcgttaaagaagctgcgccgctcgctggaaaaacagggactctccctcgacgcg
attttcgagagttaa
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