Vreelandella aquamarina SCSIO 43005: CTT34_14200
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Entry
CTT34_14200 CDS
T06424
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmd03016
]
CTT34_14200
Enzymes [BR:
hmd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CTT34_14200
Transfer RNA biogenesis [BR:
hmd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CTT34_14200
Prokaryotic type
CTT34_14200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QHD50754
UniProt:
A0A857GQF0
LinkDB
All DBs
Position
complement(2975213..2976253)
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AA seq
346 aa
AA seq
DB search
MLNLPAWQRSLTPTLGAPAPGQYRAQPEDFIVDEQLDFTPEAHGEHLWLRLEKRNQTTLD
VVKLLSRLCGVTPRDIGYSGMKDRVAVARQWLSVHLPGREAPENLSAALGAAGITVLAKA
RHPRKLKRGVHRTNHFTLRLSGEAVRPDALLPRWEALCAQGVPNYFGHQRFGAGARNLQR
AAAVLAKGWRKRDDRQGMMLSTARSFLFNELLSARLADDNWCQPIAGDTLMLDGTQSVFT
IDDVEESLVARAAALDVHPTGVLWGVGEAAGGDAGRYEAQLAAQHPALCAGLEQSGVKRG
QRALRARLIAPQATFEQEAVLLSFALPRGSFATAVIGELIHHPDTA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacctccccgcgtggcagcgcagcttgacgcccacgttgggcgcgcccgccccc
ggccagtatcgcgcgcagccggaagatttcatcgtcgatgagcagcttgatttcaccccg
gaagcccacggtgagcacctgtggctacgtcttgaaaagcgcaatcaaaccacgttagat
gtggtgaaactgctcagccgtttgtgcggtgtcaccccgcgcgatatcggctactccggc
atgaaagatcgcgtggcggtggcgcgccagtggctgagcgttcacttgcctggtcgcgaa
gcgcctgagaatttatccgccgccctcggcgcggcgggcatcacggtgctggccaaggcg
cgccatccgcgtaaattgaagcggggcgtgcaccgtacgaaccatttcacgctgcgcctg
agcggtgaagcggttcggccagacgccttactcccgcgctgggaagcactctgtgcccag
ggggtgcccaactattttggccaccagcgtttcggcgccggagcgcgcaacttgcagcgc
gccgctgccgtgctggccaaaggttggcgtaaacgggacgaccgccaggggatgatgctt
tccacggcacgcagctttctattcaacgaactgctgagcgctcggctggcggatgacaat
tggtgccagcccattgcaggcgatacgctcatgctcgacggcacccaaagcgtctttacc
atcgatgacgtcgaggagagcctagtggcgcgtgccgccgcgctggatgttcaccccacg
ggcgtcttatggggcgtgggggaggcggccggcggtgacgctggccgctacgaagcgcaa
ctggcggcccagcaccctgcgctgtgcgctgggctcgaacagagtggcgtcaaacgcggc
caacgtgcgctgcgtgcccggctgatcgcaccccaggccacgttcgagcaagaggccgtg
ctactctcattcgcgctgccccgtggtagctttgccacggcggtgattggcgaactaatt
catcatcccgatacggcatga
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