Vreelandella aquamarina SCSIO 43005: CTT34_16265
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Entry
CTT34_16265 CDS
T06424
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmd03400
]
CTT34_16265
Enzymes [BR:
hmd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CTT34_16265
DNA repair and recombination proteins [BR:
hmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CTT34_16265
Prokaryotic type
CTT34_16265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QHD51119
UniProt:
A0A857GPA7
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All DBs
Position
3422141..3423721
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AA seq
526 aa
AA seq
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MAQAPLQVVWFKRDLRIHDNAPLANAAAAGPVLPLFAIEPEQWQAPDSALRHWQFAADSL
VDLAQALNTLGLPLCLWQGDMVECLAALKAHYGELVLHSHQETGNAWSFERDQRVQAWCH
AHHVPWQEARQQGVIRGLSSRTGHQSRWESHWEALMAAPTYPAPQAAVAAHDWEAFHHVD
ITQLPSLTLGFDTTPCPQRQRGGRSEGRALWLSFITQRGRRYRGSLSKPLLAWEFGSRLS
PHLAWGTLSMREVVQSLRRQRQKHADDTAWARSLRAFTSRLYWHCHFIQKLESEPSIEHQ
TLHPALRGLRERDPEHPHLIAWKRGQTGVPLVDACMRSLTATGWINFRMRAMLLSHATFG
LGLHWYEPALHLARLFTDFEPGIHYPQVQMQAGATGTNAMRVYNPIKQAEDNDPTGEFIA
RWVPELSPLPMEWRAKPWALPESLQKRFGFQPGVDYPTPNDFEAEARHWKKLLYELRRTP
EARDASQAIVEKLASQRRPPVRRATKAKSANRQQLSLFDEGGVEDK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcaccccttcaggtcgtttggttcaaacgcgatttgcgcattcacgataac
gcaccgctggccaacgccgcagcggcgggcccggtgctgccgctatttgccatcgagcct
gagcagtggcaagcacccgacagcgccttgcgccactggcagtttgccgccgattcactg
gttgaccttgcccaagcgctcaacacgctgggcttgccgctctgcttgtggcagggcgat
atggtggagtgcctagccgcgctcaaagcccactacggcgaactggtgctgcactcccac
caagagaccggtaacgcctggagctttgagcgcgaccagcgcgttcaagcgtggtgccat
gcccaccacgtgccctggcaggaagcccgccagcagggtgtgattcgtgggctgagtagc
cgcacggggcatcaatcccgctgggaaagccactgggaagcgctgatggccgcccccacc
taccccgcccctcaagcagcggtggccgcacacgattgggaagcgtttcaccacgtggat
ataacgcagctgccctcgcttactttggggttcgataccacgccctgcccccaacgccag
cggggtgggcgcagtgaagggcgcgcgctgtggctgagctttattacccagcgcgggcgg
cgctatcgcggctcgctctctaagccgttactggcctgggagtttggatcgcggctctcc
ccgcacttggcctggggcacgctctccatgcgcgaagtggtgcaatccctgcgccgccag
cggcaaaagcacgccgacgacaccgcctgggctcgctcgctgcgcgcctttacctcccgg
ctctactggcactgccactttattcagaagctggagagcgaacccagcatcgagcatcaa
acgctgcacccggcgctgcgcggcctgcgggagcgcgacccggaacacccgcatctgatc
gcctggaagcgcggccaaaccggcgtgccgttggtggatgcctgcatgcgcagcctgact
gccaccggctggatcaacttccgcatgcgcgccatgctgctctcccacgccacctttggc
ctggggctgcactggtacgaacctgcactgcacttggctcggctgttcaccgattttgag
cccggcattcactacccccaagtgcagatgcaagcaggcgccacgggcaccaacgccatg
cgggtctacaacccgatcaagcaagcagaagataacgaccccaccggcgagtttattgcc
cgctgggtacccgagctttcgcccctacccatggaatggcgtgccaagccctgggcacta
ccggaaagcctgcagaaacgcttcggctttcaaccgggcgtcgactaccccactcccaat
gattttgaagccgaagcgcgccactggaagaagctgctctatgaactgcgccgcacgccg
gaagcgagggatgccagccaagcgattgtggagaagctggctagtcagcggcggccgcct
gtccggcgggctacaaaagcgaaatccgccaatcgccagcagctttcgctgtttgatgaa
ggcggagtggaggataagtag
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