Vreelandella aquamarina SCSIO 43005: CTT34_17115
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Entry
CTT34_17115 CDS
T06424
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Pathway
hmd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CTT34_17115 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmd03400
]
CTT34_17115 (xseB)
Enzymes [BR:
hmd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CTT34_17115 (xseB)
DNA repair and recombination proteins [BR:
hmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CTT34_17115 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
KxDL
SHOCT-like_DUF2089-C
Sigma70_ner
Motif
Other DBs
NCBI-ProteinID:
QHD51271
UniProt:
A0A857GUD7
LinkDB
All DBs
Position
3629463..3629738
Genome browser
AA seq
91 aa
AA seq
DB search
MSDTTPPQDFAATVAQLETIVERLESGELSLEDALTAFEQGVRLTRDAQQRLDSAELTVR
ALSEDADGKPNVAPFAGTQEAGDDSEETPPW
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccacacccccacaagattttgccgcaacggttgcccagctcgaaaccatt
gtggaacgcctggagtccggcgaactctcattggaagacgcgctgaccgccttcgagcag
ggcgtgcggctcacccgcgacgcccagcagcgcctcgacagcgccgagctgaccgtgcgc
gcgctgagcgaagatgccgacggcaaaccgaacgttgccccgttcgcaggcacccaggag
gctggcgacgacagcgaggagacgccgccatggtaa
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