Vreelandella aquamarina SCSIO 43005: CTT34_17740
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Entry
CTT34_17740 CDS
T06424
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hmd
Vreelandella aquamarina SCSIO 43005
Pathway
hmd03420
Nucleotide excision repair
hmd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTT34_17740
03430 Mismatch repair
CTT34_17740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmd03400
]
CTT34_17740
Enzymes [BR:
hmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTT34_17740
DNA repair and recombination proteins [BR:
hmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTT34_17740
MMR (mismatch excision repair)
Other MMR factors
CTT34_17740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QHD51381
UniProt:
A0A857GUE8
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All DBs
Position
3758682..3760880
Genome browser
AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNPAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAREMRTRLEALLGISMRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLIKRLLKDYSIDDERFPPRQVQGFISGCKEEGLRPHQVNVNGDAYLAQMVELYERYQF
TCERGGLVDFGELLLRSLELLRDNPPLLNHYRERFGHVLVDEFQDTNTLQYAWLKLLTGQ
QTPMTAVGDDDQSIYGWRGAKVENIRRFEEEFPHTQTVRLEQNYRSTSAILDAANALISH
NTERLGKNLWTDGIEGEPISVYAGFNDLEEARYIVDTIKEKVEEGFNRRDVAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPTRGIG
TRTVEIVRHRAREQGVSLWQALHDAIQDGTLRGRAGNAVQAFANLIEQLDNDAAGLPLHE
IIDHVTAHTGLIEHHKSERGEKGQARVENLEELVTAARAFTHGDAFETPEAGEGMAALEA
FLSEAALNAGDHEAEEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSVEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHVSRP
VTASRQSFAQTSIESDGELPALHVGQRVEHPVFGEGIILNAEGEGARARVQVSFDGEGVK
WLVLGFAKLTPR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatacttgatcagctcaaccccgctcagcgggaggcagtgagc
gccccccagggcaatctactggtactggcgggggctggctccggtaaaacccgcgtgctg
gttcaccgcattgcctggctgatgcaggccgaggggctctctccttacgcgctgctggca
gtcacgtttaccaacaaagcagcgcgggaaatgcgaacgcgcttagaagcgctgctgggt
atttccatgcgccacgtgtgggtcggcaccttccactccattgcccaccggctgctgcgt
acccactggcaagatgcccgcctgccgcaacacttccaaatcattgactccgacgaccag
ctccggctgatcaaacggctgctcaaagattactcgattgacgatgagcgcttcccgccc
cgccaggtacaggggtttatatctggctgcaaagaggaagggctgcgccctcatcaggtg
aacgtgaatggcgatgcgtacctcgcccaaatggtcgagctgtacgagcgctatcagttc
acctgtgagcgcggcgggctggtggattttggcgagctactcctgcgcagcctggaactt
ctgcgcgataacccgccgctgctgaaccactaccgcgagcgttttgggcatgtgctggta
gacgagttccaagacaccaacaccctgcagtacgcgtggctgaaactgctcaccggccaa
caaacgccgatgacggcggtcggcgatgatgaccagtcgatttacggctggcggggcgcc
aaagtggaaaacatccgccgctttgaagaggagtttccccatacccagacggtgcgcctg
gagcagaactaccgctcgaccagcgccattctggatgccgccaacgcgttgattagccac
aacaccgagcggctgggcaaaaacctctggaccgacggtatcgagggcgaaccgatctcg
gtatacgccgggtttaacgacctggaagaagcccgctatatcgtcgacaccatcaaagag
aaagtggaggaaggcttcaatcgccgtgatgtcgccatcctgtaccgctccaacgctcag
tcgcgactgctggaagagacgttgattcgccaaggcatgccctaccgcatttacggaggc
caccgcttttatgagcggctggagatcaaaaacgccctggcctaccttcgcctgctgctc
aaccgggacgacgacgcctccctggaacgcgtcatcaacgtgcccacccgaggcatcggc
acccgcacggtggaaattgttcgccaccgcgcacgagaacagggcgtttcgctctggcag
gcgctccacgacgcgattcaggatggcaccttaagaggccgggcgggcaacgccgtgcag
gccttcgccaacctaatcgagcagctcgataacgacgccgcagggctgccgctgcatgag
atcatcgaccatgtcaccgcgcacaccgggttaatcgagcaccacaaaagcgagcgtggc
gagaagggccaggcgcgggtcgaaaacttggaagagctggtcaccgccgcccgcgccttc
acccatggcgacgcctttgaaaccccggaagcgggcgaaggcatggcggcgctggaagca
tttttatcagaagctgccctcaacgcaggcgaccacgaagccgaagagttcgaagacagc
gtgcagctgatgacgctgcactcggcgaaagggcttgagtttccggtggtgttcatcgcc
ggtgtggaggaggggctgttcccgcataagatgtcggtggaggagcctgggcggcttgag
gaggagcgcaggctttgctacgtgggcgttacccgcgccatgcagaagctctacctcacc
cacgcggaaacccgccgcctgcacggtaaagaggtatttccgcgtccgtcgcgcttcttg
cgtgaactgccaccccacctgctggaggaggtccgcctacggggccatgtgtctcgcccg
gtgaccgcctcgcggcaaagcttcgcccaaaccagtatcgagagcgacggcgagctcccc
gcgctgcatgtcggccagcgcgtcgagcatccggtgtttggcgaaggcatcatcctcaat
gccgaaggcgaaggcgcccgggcgcgggtacaagtcagcttcgatggcgagggcgtgaag
tggctcgtactggggtttgccaaactaacgccgcgttga
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