Haloferax mediterranei: HFX_0176
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Entry
HFX_0176 CDS
T02129
Symbol
dnaN
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
hme
Haloferax mediterranei
Pathway
hme03030
DNA replication
hme03410
Base excision repair
hme03420
Nucleotide excision repair
hme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HFX_0176 (dnaN)
03410 Base excision repair
HFX_0176 (dnaN)
03420 Nucleotide excision repair
HFX_0176 (dnaN)
03430 Mismatch repair
HFX_0176 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hme03032
]
HFX_0176 (dnaN)
03400 DNA repair and recombination proteins [BR:
hme03400
]
HFX_0176 (dnaN)
DNA replication proteins [BR:
hme03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HFX_0176 (dnaN)
DNA repair and recombination proteins [BR:
hme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HFX_0176 (dnaN)
MMR (mismatch excision repair)
Other MMR factors
HFX_0176 (dnaN)
TLS (translesion DNA synthesis) factors
Other TLS factors
HFX_0176 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
AFK17917
UniProt:
I3R107
LinkDB
All DBs
Position
complement(167154..167897)
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AA seq
247 aa
AA seq
DB search
MFKAIVSAATLRDALDSVSVLVDECKIRLNEERLSIRAVDPANVGMVDLSLDAAAFESYE
ADGGVIGVNLSRLEEVAGMAGSGDLIHLTLDEETRKLNIRIDGLSYTLALIDPDSIRQEP
DIPDLDLPANIVLEGTHLDRGIKAADMVSDHIRLRVDSTEETFHVEAEGDTDDVDLSLPP
ADLISIEAGSADSLFSLDYLKDMNKAIPADAEVTVELGEEFPVKLHYQIAEGMGNITYML
APRIQSD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggccatcgtgagtgccgcgacgctccgggacgcgctcgactctgtgagcgtc
ctcgtcgatgagtgtaagattcgactcaacgaggagaggctctctatccgtgccgttgac
cccgcgaacgtcggtatggtggacctctcgctcgacgctgcggcgttcgaatcctacgag
gctgacggcggcgtcatcggtgtcaacctctctcgcctcgaagaggtcgctggcatggcg
ggttcgggtgacctcatccacctcacgctcgacgaggagacgcgcaaactcaacatccgc
atcgacggactctcgtacacgctcgcgctcatcgaccccgattcgattcgacaggagccg
gacattccggacctcgaccttcctgcgaacatcgtcctcgagggcacgcacctcgaccgc
ggtatcaaggcggccgacatggtttcggaccacatccgtcttcgcgtcgacagcaccgaa
gagacgttccacgtcgaagccgaaggcgacaccgacgatgtcgacctctcgcttcccccg
gcggacctcatcagcatcgaagctggtagcgccgactcgctgttctcgctcgattacctc
aaggacatgaacaaggcgattccggccgacgccgaagtcaccgtcgaactcggcgaagag
ttcccggtcaaactccactaccagattgccgaagggatgggcaacatcacgtacatgctc
gccccgcgcatccagagcgactaa
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