Haloferax mediterranei: HFX_0231
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Entry
HFX_0231 CDS
T02129
Symbol
tfb1
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hme
Haloferax mediterranei
Pathway
hme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HFX_0231 (tfb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hme03021
]
HFX_0231 (tfb1)
Transcription machinery [BR:
hme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HFX_0231 (tfb1)
Prokaryotic type
Archaeal type
TFB
HFX_0231 (tfb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
UNC45-central
Motif
Other DBs
NCBI-ProteinID:
AFK17972
UniProt:
I3R162
LinkDB
All DBs
Position
complement(220815..221681)
Genome browser
AA seq
288 aa
AA seq
DB search
MSEARSPQGCPECDGHLGAEAGETVCTDCGLVVSEYRIDHGPEWRSFADDDRNPARTGAP
LTRSRHDRGLSTEIGRSTRIKGRKRRKFARLRRQHNRARISSKRERNQVYAFTEIRRVTG
ALGLPNHIRDQACSLFESAQNEDLLRGRSLEGFAAACVYAACRVAGISRSVEEVCDVSKS
TESEHQAAYRALNRDLGLPVAPADPTEYLPRFATKLDLDRDTERRAREYVAEARDDGLVA
GKNPCGVAAACLYTAARDLGEDCTQSDAADVADVTPVTLRKTYVALRD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacgttccccccagggttgccccgaatgcgatggacacctcggcgccgaa
gccggcgagacagtctgtaccgactgcggactcgtcgtctcggagtaccgcatcgaccac
ggtcccgagtggcgctcgttcgccgacgacgaccgaaaccccgcccgtacgggcgcacca
ctcactcggtcccgtcacgaccgcggcctctcgaccgaaatcggtcggtcgacgcgtatc
aaaggtcgtaagcgtcggaagttcgcccgtctgcgccgtcagcacaatcgcgctcgaatc
tcctcgaagcgcgagcggaatcaggtgtacgccttcaccgaaatccgtcgcgtgacgggt
gcactcggtctgccaaaccacatccgcgaccaggcctgttcgctgttcgaatcggcgcag
aacgaagacctcctccgcggccggtcgctcgaagggttcgccgccgcctgtgtctacgcc
gcctgccgcgtcgccggaatctcccggagcgtcgaggaagtctgcgacgtctcgaaatcg
acggaatccgagcaccaagcggcctaccgcgccctcaaccgcgacctcggtctccccgtc
gcgcccgctgacccgaccgagtacctgccgcgattcgcgacgaaactcgacctcgaccgc
gacaccgaacgccgggcgcgcgagtacgtcgccgaagcgcgcgatgacggtctcgtcgct
ggcaagaacccctgtggcgtcgccgcagcgtgtctctacacggccgctcgcgacctcggc
gaagactgcacgcaatcggacgccgccgacgtggccgacgtgactcccgtgacgctccgc
aagacgtacgtggccctccgcgactga
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