Haloferax mediterranei: HFX_0304
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Entry
HFX_0304 CDS
T02129
Symbol
bat
Name
(GenBank) bacterioopsin activator
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hme03000
]
HFX_0304 (bat)
Transcription factors [BR:
hme03000
]
Prokaryotic type
Helix-turn-helix
Other families
HFX_0304 (bat)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_9
HTH_10
PAS_4
GAF_2
PAS
PAS_3
PAS_8
Sigma70_r4
GAF_3
GAF
Sigma70_r4_2
HTH_20
HTH_11
PP2C_2
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AFK18043
UniProt:
I3R1D3
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All DBs
Position
284297..286300
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AA seq
667 aa
AA seq
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MNESTPLPRVLAVVVDADRGRLEDVLSPLPVETVSSVEAARRRLRGNSIDCVVVASDRAD
DIENLHAETAAPLVAVVPEDGYLSSADAHDAGAADVVPLVDSNLFERLPERIRSAVAWRR
YGTEASGQITEDLKEQAMDEAPVGITIADCSLPDLPLVYVNEAFESLTGYSAEAALGRNC
RYLQGPRTNLEQVAELRRAIEAEESASVELLNYRESGETFWNRVDVAPLSGPDGAVTHYV
GFQTDITERVRAEAAAEQYAARVEEERTRLQTLVDHIEGLLEDVTSALVRAETRQDLEAT
VCDRVAETEQFDCAWIGDCDLSPATIVPSEWAGSTGSSIEALEIDRDDATDPTARAVQTR
TVQSGTVPDGPVHEDSHVPFQSVIAVPLIHRETLYGVLTVYADTNPDTDTDSNSDTLNEE
ITAVFGTLGRAVGAAIDAFESRRSLLSDDVLELDVNVSDSTQPLVRLAAAAGCQLQYEGA
VPHDDGTLSLFVSTPPSTNLDEVDFEPDGVSEVTRLPRGDNIGLYDVTLTSGSLAHLVAD
AGGRITDLEADKHGCRFTTVVPDRTVGRSLLDDLKSAADGVELRAVRDRAAPPQTPREFV
ASLSAELTDRQHTALQLAYLGGFFEWPHGVTGDELADAMDISRATFHQHLRAAERKLVSG
FFERHPA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatcgacgccactccctcgcgtccttgcggtcgtcgttgatgctgaccgaggc
cgactcgaagacgtactctcgccgctccccgtcgagaccgtctcctcggtcgaggcggca
cgacggcgactccgaggcaactcgatagactgcgttgtggttgcgagcgaccgggccgac
gatatcgagaatttgcacgctgagactgcggccccactcgtcgcagtcgttcccgaggat
ggttacctctcgtctgcggacgcacacgacgccggtgccgcagatgttgtcccgctcgtc
gactcgaatctcttcgaacgacttccggagcgaattcggagcgccgtcgcgtggcgtcgc
tacgggacggaagcgtccgggcagattactgaggacctgaaagaacaagcaatggacgag
gctccggtcggcatcaccattgccgactgttcgctgccggacctgccactcgtctacgtc
aacgaggcattcgagtcgttgactggctacagcgccgaggcagcgctgggccggaactgt
cgatatctgcagggaccgaggacgaatctcgaacaagtggccgaactccgtcgggccatc
gaagccgaagaatcggcgtccgtcgaacttctgaactaccgcgagagcggcgaaacgttc
tggaaccgcgtcgatgtcgcaccactgagtggcccggatggagcggtgacacactacgtc
gggttccagaccgacatcacagagcgggtccgtgcggaagcggccgcagaacagtacgct
gcacgggtcgaagaggaacgaacacggcttcagacgctcgtcgaccacatcgaagggctt
ctcgaagacgtgacgagtgcgctcgtcagagcggagacgcgccaagacctcgaagccact
gtgtgcgaccgagtcgctgaaaccgagcagttcgattgcgcgtggattggggactgcgac
ctctcaccagcgactatcgtcccgagtgagtgggcggggagtaccgggtcgtctatcgaa
gcactcgaaatcgaccgcgatgacgcaactgacccgacagcacgggccgtccagacgcgg
actgtccagtcagggacagttccggatgggccagtgcacgaggattcgcacgtcccgttt
caatcagtcattgcggttccactgattcaccgggagacgctctacggtgttttgacagtc
tatgcggacacgaatccggatactgacacggacagtaactctgatactctcaacgaggag
ataacggctgtctttggaacactcggaagagccgtcggtgcggctatcgacgcgttcgag
agtcgccggtcgctcctctcggacgacgttctcgaactcgacgtgaacgtgagtgactcg
actcaaccgctggttcgccttgcggccgccgccgggtgtcaactccagtacgaaggggcc
gtcccacacgacgacggaacactcagcctgttcgtttcgacgccgccatcgaccaacctc
gacgaggtggacttcgaaccagatggcgtgtccgaggtcacacgtcttccccgcggagac
aatatcggcctgtacgatgtgacactcacatcggggtcgctcgcgcatctcgtggcagac
gcaggcgggcggataaccgacctcgaagcggacaaacacggctgtcggttcaccaccgtg
gtccccgaccggacggtgggtcggtcgttactcgacgacctgaagagtgcggcggacggc
gtcgaacttcgcgccgtcagagaccgcgcggctccgccacagacaccccgagagttcgtc
gctagcctcagcgcggaactcaccgatagacaacacactgcgcttcaactcgcgtatctg
ggtgggttcttcgagtggccacacggcgtcacgggtgacgaactcgccgacgcgatggat
atctcccgtgcgacgttccatcaacacctccgggcggccgagcgaaaactcgtctcggga
ttcttcgagagacatcctgcgtag
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