Haloferax mediterranei: HFX_0307
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Entry
HFX_0307 CDS
T02129
Symbol
erf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
hme
Haloferax mediterranei
Pathway
hme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HFX_0307 (erf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hme03019
]
HFX_0307 (erf1)
03012 Translation factors [BR:
hme03012
]
HFX_0307 (erf1)
Messenger RNA biogenesis [BR:
hme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HFX_0307 (erf1)
Translation factors [BR:
hme03012
]
Eukaryotic type
Release factors
HFX_0307 (erf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
DUF7811
Motif
Other DBs
NCBI-ProteinID:
AFK18046
UniProt:
I3R1D6
LinkDB
All DBs
Position
complement(287743..288987)
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AA seq
414 aa
AA seq
DB search
MSSDAEGPSDDRRKYEFKKVIEDLREYEGSGTQLVTIYIPEDKQISDVVEHVITEHSEAS
NIKSKQTRTNVQDALTSIKDRLRYYDTFPPERGIVMFSGAVNSGGGQTDMVTKVLESPPE
PIQSFRYHCDSNFLTGPLEDMLMDKGLFGLVVLDRREANVGWLKGKRVEPVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVPKRHDMDGILVGGPSPTKDEFLDG
DYLHHELQDLVVGKFDVAYTDESGLYDLVDAGQDALADQEVIKDKKQMEEFFEKLHRGNE
STYGFEATRKNLVMGSVDRLLISEDLRKDVAIYDCGGQEEYELIDHRHDTPSHDCEDGSE
AELKEREDVIEFLMDLADQRGTETKFISTDFEKGEQLYDAFGGIAGILRYSTGV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgacgccgaggggccgagcgacgaccgccgaaagtacgaattcaagaaggtc
atcgaggacctcagagagtacgaaggctcaggaactcagctcgtcacgatctatatcccc
gaagacaagcagatatctgacgttgtagagcacgtcatcacagagcacagcgaagcgtct
aacatcaaatcgaagcagacgcggacgaacgtccaagacgcactcacgagtatcaaagac
cgcctccgctactacgacaccttcccacccgaacgcggtatcgtcatgttctccggtgcg
gtcaactccggcggcggccagaccgatatggtcacgaaggtactcgaaagcccgccagag
ccgattcagtcgttccggtaccactgcgactcgaacttcctcaccggaccgctcgaagac
atgctcatggacaagggcctgttcggtctcgtcgtcctcgaccgccgcgaggccaacgtc
gggtggctgaaaggcaagcgcgtcgaaccggtcaagagcgcttcgtcgctcgtccccgga
aagcagcgcaaaggtggtcagtccgcccagcgtttcgcccgcctccgcctcgaagccatc
gacaacttctatcaggaggtcgccggcatggcgaatgacctgttcgtcccaaaacgacac
gatatggacggcatcctcgtcggtggtccctcaccgacgaaagacgagttcctcgacgga
gattacctccaccacgaacttcaggacctcgtcgtcgggaagttcgacgtggcgtacacc
gacgaatccggcctgtacgacctcgtcgacgccggccaggacgcgctggccgaccaagag
gtcatcaaggacaaaaagcagatggaggagttcttcgagaaactccaccgcggaaacgag
tccacctacgggttcgaggcgacacgtaagaacctcgttatggggtctgtcgaccgcctc
ctcatctccgaggacctgcggaaggacgtcgccatctacgattgtggcgggcaagaagag
tacgaactcatcgaccaccggcacgacacgcccagccacgactgcgaagacggctccgaa
gccgaactgaaggaacgcgaggacgttatcgagttcctgatggacctcgcagaccagcgt
ggcaccgagacgaagttcatcagtacggacttcgagaaaggcgaacagctctacgacgct
ttcggtggcatcgccggcattctccggtactccaccggcgtctaa
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