Haloferax mediterranei: HFX_0374
Help
Entry
HFX_0374 CDS
T02129
Symbol
cafA
Name
(GenBank) hypothetical protein
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hme03009
]
HFX_0374 (cafA)
Ribosome biogenesis [BR:
hme03009
]
Prokaryotic type
rRNA processing factors
HFX_0374 (cafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF402
S1
Tcp10_C
Motif
Other DBs
NCBI-ProteinID:
AFK18110
UniProt:
I3R1K0
LinkDB
All DBs
Position
complement(352396..353802)
Genome browser
AA seq
468 aa
AA seq
DB search
MKVRVRGIYTTALTRLFLDAGHNIVQASAPIRERFDTEFESTDHDVSVETTRNRQGVGAM
GTPDAVATATEQLCDLGIDTFAWDDPAPTGAVFDARVTETLGGGAICDLGETEGYLSYGD
FDGRVEVGDEVRVQISESAPPWASRRAELTGDIRAIAGLATLDPDTDGVRVDTRDEAAAR
ELAGMTDLLGGDPPEGWGIRWHRDAVDADMSALDDALDRAAEVASELDAALDEPVDAPRT
VAAPTATNWVWFGRETRFELDKHRRAVETTMPGHHRTKAASPKASAGVDLAEALCASVGD
GEFPFGVVTAQFGPREGDDVEIGHGKPDGRLITLGSGEVSEYDPEGTLELRRQMTGGGTY
DALGVDRESGDVAITKFREGRWWYPTVYRSSEGGVKGTYVNICTPVECFPDRIRYTDLHV
DVVKHADGTVERVDDDELEEAVEAGHISAELAEKARSVASSLESALSG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtccgcgttcggggcatctacaccacggcgctgactcggttgttcctcgacgcc
ggccacaacatagtccaggcctccgcgccgattcgagagcggttcgacaccgagttcgag
tctacggaccacgacgtgtcggtcgaaaccacgcgaaaccgacagggtgtcggcgcgatg
ggaacgcccgacgcagtcgccaccgctaccgagcagttgtgcgacctcggcatcgacacc
ttcgcgtgggacgacccggccccgaccggtgcggtgttcgacgcccgcgtaaccgagacg
ctcggcggcggtgccatctgcgacctcggcgagacggaagggtatctttcctacggcgac
ttcgacggccgtgtcgaggtcggcgacgaggtccgtgtccagatttccgagtcggctccg
ccgtgggcgagtcgtcgcgcagaactgacgggcgacatccgcgctatcgccggtctcgcc
acgctcgacccggatacggatggcgtccgcgtcgacacgcgagacgaagccgcggcccgc
gaactcgccgggatgaccgacctgctcggcggtgacccgccggaggggtggggaatccgc
tggcacagagacgccgtcgatgccgacatgagcgcgctcgacgacgcgctcgaccgggcc
gccgaggtcgccagcgaactcgacgcagctctcgacgaaccggtcgatgcaccccgcacg
gtcgccgcaccgacggcgacgaactgggtctggttcggccgcgagacccgtttcgaactc
gacaagcatcgtcgagccgtcgagacgacgatgcccggccatcaccggacgaaggccgcg
tcgccgaaggcctccgcgggtgtcgacctcgccgaagcactctgcgcatcggtcggcgac
ggcgaattcccgttcggcgtggttactgcgcagttcggcccacgcgagggcgacgacgtg
gaaatcggccacgggaagcccgacggccgactcatcactctcggctccggagaggtttcg
gaatacgaccccgaaggaaccctcgaactccgccgccagatgaccggcggcggaacctac
gacgccctcggcgtcgaccgcgagtcgggcgacgtggcgataacgaagttccgcgaagga
cgctggtggtacccaaccgtctaccgaagttcggaaggcggggtgaaggggacttacgtc
aacatctgtactccggtggagtgcttcccggaccggattcgctacaccgacctccacgtc
gacgtggtgaaacacgccgacggtaccgtcgagcgtgtcgacgacgacgagttagaagag
gcggtcgaagccggacatatctcggcggaactcgcggagaaagcgcggtcggtggcgtcg
agtctggagtcggcgctgtcgggataa
DBGET
integrated database retrieval system
