Haloferax mediterranei: HFX_0390
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Entry
HFX_0390 CDS
T02129
Name
(GenBank) putative ATPase RIL
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hme03009
]
HFX_0390
Ribosome biogenesis [BR:
hme03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
HFX_0390
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
AAA_23
AAA_16
AAA_22
AAA
AAA_29
RNA_helicase
NB-ARC
Fer4
Rad17
AAA_24
Fer4_6
Fer4_7
Fer4_10
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
AFK18126
UniProt:
I3R1L6
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All DBs
Position
370137..371951
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AA seq
604 aa
AA seq
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MADDSIAVVDLDRCSPDRCSYECSNFCPPNRTGKECITLRGEDAEQGGPDQVRISEEICL
GETCGICVEKCPFDAIEIINLPSELDEDPTHRYGENAFSLYGLPVPESGSVTGILGPNGI
GKTTAVRALAGEMVPNLGNYDDEPSWEAVLDRFRGTELQNYVEQVRDGEVTIARKPQYVD
QIPKQFDGKARELLEATDERGALDSYIDRLDIGPVVDNHIDTLSGGELQRVALAATLARD
RDFYFLDEISPYLDIGQRVTAARLIRELAEDEDRAVLVVEHDLAILDLLADTLHVAYGEP
GAYGVVTDPKSVRNGINEYLKGYLTNENMRIRPEAITFEEHAPRETTKAEPLIEYPELSK
SYGDGEFSLDVDSGTIYNGEVLGIVGPNGIGKSTLAQLFTGDLTPDMGELDFALDISYKP
QYIEIDQPMRVDAFLSSITDQFGSSYWNTEIANPLQLNRIMERNLTDLSGGERQRVAIAA
CLSQNADLYLLDEPSAHLDVEQRVQATSAIRRYAENHDATVMVIDHDIYMMDLLADRLMV
FDGEPSIEGHASKPQEMRNGMNDFLSDLDITFRRDERTSRPRINKPESQLDREQKRSGEY
YYAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatagtatcgccgtcgtcgacttggaccggtgttccccggaccgctgtagc
tacgagtgctcgaacttctgtccgcccaaccggacgggcaaagagtgcatcacgcttcgc
ggcgaggacgccgaacagggcggtcccgaccaggtccgcatctccgaggaaatctgtctc
ggtgagacctgtggtatctgtgtcgagaagtgtcccttcgacgctatcgaaatcatcaac
ctcccgtccgaactggacgaggacccgacccatcggtacggcgagaacgccttctcgctg
tacggactgcccgtccccgaatcggggtctgtcacgggtatcctcggcccgaacggtatc
gggaagacgaccgccgtccgcgccctcgccggcgagatggtgccgaacctcggcaactac
gacgacgaaccgtcgtgggaggccgtcctcgaccgcttccgcggtaccgaactccagaat
tacgtcgagcaagtccgcgacggcgaggtcaccatcgcccgcaagccgcagtacgtcgac
cagattcccaagcagttcgacgggaaagcccgcgaactcttggaggcgaccgacgaacgc
ggcgcgctcgattcttacatcgaccgcctcgacatcggcccggtcgtcgacaaccacatc
gacacgctctccggcggggaactccagcgcgtcgcgctcgcagcgaccctcgcccgcgac
cgcgacttctacttcctcgacgagatttcgccgtacctcgacatcggccagcgcgtcact
gcggcgcgtctcatccgagaactcgccgaggatgaagaccgcgcagtgctcgtggtcgaa
cacgacctcgccatcctcgacctcctcgccgacacgctccacgtcgcgtacggtgaaccc
ggcgcgtacggtgtcgtcacggaccccaaatcggtccggaacggcatcaacgagtatctg
aaaggatacctcacgaacgagaacatgcgtatccgcccggaggcaatcaccttcgaggaa
cacgcgccgcgcgagaccacgaaggccgaacccctcatcgagtaccccgaactgagcaag
tcctacggcgacggagagttctccctcgacgtcgattcggggaccatctacaacggcgaa
gtcctcggtatcgtcggcccgaacgggattggtaaatccacgctcgctcaactgttcacg
ggcgacctgacgcccgacatgggcgaactcgacttcgcgctcgacatctcgtacaagccg
cagtacatcgaaatcgaccagccgatgcgcgtggacgccttcctgtcgtccatcaccgac
cagttcggctcgtcgtactggaacacggaaattgcgaacccgttgcaactcaaccgcatc
atggagcgcaacctcaccgacctctccggcggtgagcgccagcgcgtcgctatcgccgcg
tgtctctcgcagaacgccgacctctacctgctcgacgaaccgtcggcccacctcgacgtc
gaacagcgcgtgcaggccacgtcggccattcgccgctacgccgagaaccacgacgcgacg
gtcatggtcatcgaccacgacatctacatgatggacctgctggcggaccgcctgatggtc
ttcgacggcgaaccgtctatcgaggggcacgcttcgaagccacaggagatgcgaaacggc
atgaacgacttcctgtcggacctcgacatcacgttccgccgcgacgagcgcacttcgcgc
ccgcgcatcaacaagcccgaatcacaactcgaccgcgagcagaagcgctccggcgagtac
tactacgccgaatag
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