Haloferax mediterranei: HFX_0821
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Entry
HFX_0821 CDS
T02129
Symbol
sbcD
Name
(GenBank) DNA double-strand break repair protein mre11
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hme03400
]
HFX_0821 (sbcD)
DNA repair and recombination proteins [BR:
hme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HFX_0821 (sbcD)
Archaeal homologous recombinant proteins
HFX_0821 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AFK18543
UniProt:
I3R2T3
LinkDB
All DBs
Position
773592..774959
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AA seq
455 aa
AA seq
DB search
MTRVIHTGDTHIGYQQYHSPERRQDFLDAFEQVVADARSENVDAVIHAGDLYHDRRPELP
DLLGTLAALRRLDDAGIPFLAIVGNHESTRGGQWLDLFERLGLATRLGSDPYVVGDVAFY
GLDHVPRSRRDELDYQFEPHDQPQTALVAHGLFTPFAHADWETETVLAESNVDFDAMLLG
DNHVPDTADLDGTWVTYCGSTERASASERDPRGYNLVEFDSSAVDIRRRTLETRPFEFIE
VDLSGDEGIDRVRQRVREFDCEDAVVVVELTGEGDAVTPAAVESFAAEQGALVARVNDRR
EVDTDEELSTDVSFADPDDAVRDRVREMGLSSAALDVDETVRASKVADSNVRDEVRERVA
SLLSDDRSAFVTAGPETEEEGSSGEDESDDEPASATDAGEIPDEPTSTSDMGGTPDEPSE
SIARSEPEPVADVETESGTDAEPKANRDSSLGDFA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacacgggtgatacacaccggcgacacccatatcgggtaccagcagtaccactcgccg
gagcgccgccaagatttcctcgacgccttcgaacaggtcgtcgcggatgcacgctcggag
aacgtagacgcggtcatccacgcaggtgacctctatcacgaccgccgtcccgaactcccc
gaccttctcggaacgctcgccgcgcttcgtcgcctcgatgacgccgggataccgtttctc
gccatcgtcggcaaccacgagtcgacacgcggcgggcaatggctcgacctcttcgaacgt
ctcggattggcgactcgactcgggagcgacccgtacgtcgtcggcgacgtggcattctac
ggtctcgaccacgtcccgcgctctcgacgagacgaactcgactaccagttcgaaccgcac
gaccaaccgcagacggcactcgtcgcacacggtctctttaccccgttcgcccacgccgac
tgggagacggagacggtcctcgccgaatcgaacgtcgacttcgacgcgatgcttctcggc
gacaatcacgtccctgatacggcggacctcgacggtacgtgggtgacctattgcggttcc
actgagcgcgcgagcgcgagcgagcgagacccgcgcggatacaatctcgtcgagttcgac
tcttcggcggtcgatatccgccgtcgaacgctcgaaacgcggccgttcgaattcatcgag
gtcgacctctcgggcgacgagggaatcgaccgcgtgcgccagcgcgtccgcgagttcgac
tgtgaggacgccgtcgtcgtcgtcgaactgaccggcgagggtgacgcagttacgcccgct
gcggtcgaatcgttcgccgccgaacagggcgcgctcgtcgcccgcgtcaacgaccgacgc
gaagtcgacaccgacgaagaactctcgaccgacgtgtcgtttgccgaccccgacgacgcg
gtccgcgaccgggtccgcgagatgggcctatcgagcgctgcactcgacgttgacgagacg
gttcgcgcgagcaaagtcgccgattcgaacgttcgcgacgaggttcgagagcgcgtcgcg
tcgcttctttctgacgaccggagtgccttcgtcaccgctgggccagagacggaggaagaa
gggtcctcgggcgaagacgagtccgacgacgaacctgcttccgctaccgacgcgggtgag
atacctgacgaaccgacatccaccagcgacatgggtggtacgcccgacgaaccctccgag
tccatcgcccgttccgagcctgaacccgttgccgacgtagaaaccgagtccggcaccgac
gcagaaccgaaagccaaccgcgacagttcgctgggtgatttcgcatga
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