Haloferax mediterranei: HFX_0822
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Entry
HFX_0822 CDS
T02129
Symbol
rad50
Name
(GenBank) chromosome segregation protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hme03400
]
HFX_0822 (rad50)
DNA repair and recombination proteins [BR:
hme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HFX_0822 (rad50)
Archaeal homologous recombinant proteins
HFX_0822 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_21
AAA_27
AAA_29
Baculo_PEP_C
AAA_13
ABC_tran
ATG14
Spike_torovirin
Spectrin_Anc-1
DUF16
PTAC
SlyX
ZnF_RZ-type
DUF1664
DUF3584
FapA
Motif
Other DBs
NCBI-ProteinID:
AFK18544
UniProt:
I3R2T4
LinkDB
All DBs
Position
774956..777637
Genome browser
AA seq
893 aa
AA seq
DB search
MRFTHISIQNFKPYEDAELDLRDGVTVIHGVNGSGKSSLLEACFFALYGSKALAGTLDDV
VTTGADDAEISLEFVHDGGEYRIDRRIRISGDRATTAKCVLEGPDGSVEGARDVRRHVGS
LLRMDAEAFVNCAYVQQGEVNKLINATPAQRQDMIDDLLQLGKLEQYRERAGNARLGVED
VLTSKQSVLEDIESQIAAKEDEDLHARLNALESDLVEVDEKIEHYESQRDKAKSALDAAQ
STLDEHAENRERLAEVESAIEDLKSKVAADEAERDKLTERIRELGEELDDLDEDIETVLE
QTALDDASEEAIAARREAFADRESEIRDELSEARTRAQGLATQAERLEERADDLETRAEE
KREAAEADEQTADEAASELESFRETSADIEASLETIEASFADAPVELGEAADLLDERRSD
LSSARESLAETETELKNARERLAEAEELRDAGKCPECGQPVDGSPHVDAISEREGAVERL
ESERETLESKVESLKEAVEAAEKLVDAESRADSYTDRLELAAERIADREETVETRREAAT
EKREAADDLESEAEEKREAATKQAERAAEVEETVESLESDLESLDARRERLDRVESLVDT
RADTVDARDRLREKRETLADVNRERREHLQERQKRRDELRETVDEDAVKKAKTSKQKAET
YLEKVEDEVLPDLREQRDDLQSQIGGVNADLERLDELRERREELAERVDALESLHDEVST
LESTYGDLRAELRQRNVEVLERMLNETFDLVYANDAYSRIRLDGEYGLTVFQKDGTALEP
EQLSGGERALFNLSLRCAIYRLLAEGIDGAAPLPPLILDEPTVFLDTGHVSRLVDLVEDM
QNRGVKQILIVSHDDELVGAADDLVRVEKNPTTNRSTVERTDAPTLASALADD
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagattcacgcacatcagcattcagaacttcaagccgtacgaggacgccgaactcgac
cttcgcgacggcgtcacggtcatccacggcgtcaacgggagcgggaagtcgtcgctcctc
gaagcgtgtttcttcgccctctacgggtcgaaagcgctggctgggacgctcgacgacgtg
gtgacgaccggcgctgacgacgccgaaatctcgctcgaattcgtccacgacggcggcgag
tatcgtatcgaccgccgaatcaggatttcgggcgaccgcgcgaccaccgcgaagtgtgtt
ctcgaaggaccggacgggtccgtcgagggcgcgcgcgacgttcgacggcacgtcgggtcg
ctcctgcggatggacgccgaggcgttcgtcaactgcgcgtacgtccagcagggcgaggtc
aacaaactcatcaacgcgacgccggcacagcgtcaggacatgattgacgacctcctgcaa
ctcgggaaactcgaacagtaccgagaacgggccggaaacgcccggttgggggtcgaagac
gtactgacgagcaagcagagcgtcctcgaagatatcgagtcgcaaatcgcggccaaggag
gacgaagacctccacgcgcgactcaacgccctcgaatcggacctcgtcgaggtagacgag
aaaatcgagcactacgagtctcaacgagacaaagctaaatcggcccttgacgccgcccaa
tcgacgctggacgaacacgcagaaaatcgggagcgactcgccgaagtcgaatccgccatc
gaggacctcaaatcgaaagtcgcggccgacgaagcagagcgcgacaaactcacggagcga
atccgggaactcggtgaggaactcgacgacctcgacgaggacatcgaaaccgtgctggag
caaaccgcactcgacgatgccagcgaggaggcaatcgccgcccgtcgggaggcgttcgcc
gaccgggagtcggagattcgagacgaactttcggaagcccggacgcgggcgcaaggactc
gccacgcaggcagaacggctcgaagagcgcgcagacgacctcgaaactcgcgccgaggag
aaacgcgaggccgccgaagcggacgaacaaacggccgatgaggcagcgagcgaactcgaa
tcgttccgcgagaccagcgcagacatcgaagcctcgctcgaaaccatcgaagcgtcgttc
gctgacgcgcccgtcgaactcggcgaggcggccgaccttctcgacgaacgccggagcgac
ctctcttcggcccgcgagtcacttgccgaaaccgagaccgagttgaagaacgcccgcgaa
cgactcgccgaagccgaggaactccgcgacgcgggcaagtgtccggagtgtggccaaccg
gtcgatggctccccccacgtggacgccatcagcgaacgcgagggggcggtcgagagactc
gaatccgagcgagagacgctcgaatcgaaggtcgagtcactgaaagaagcggtcgaagcg
gctgagaaactagtcgacgccgaaagccgcgccgactcctacacagaccggctcgaactt
gccgccgaacgaatcgccgaccgcgaggagacggtcgaaactcgacgtgaggcagctacg
gagaaacgtgaagccgcagacgacctcgaatcggaggccgaagaaaagcgcgaggcggcg
acgaaacaggccgagcgcgcggcggaagtcgaggagacggtcgagtccctcgaatcggac
ctcgaatcgctcgatgctcgccgagagcgactggaccgcgttgaatctctcgttgacacg
cgagcggacacggtcgatgcccgcgaccgcctccgagagaagcgcgagacgcttgcggac
gtaaaccgcgagcgacgtgaacacctccaagagcgccagaagcgacgtgacgaactccgc
gagacggtcgacgaagatgcggtcaagaaggccaaaacgagcaaacagaaggccgaaacg
tacctcgaaaaggtcgaagacgaagtgctcccagacttgcgggagcaacgcgacgacctc
cagagccaaatcggtggcgtcaacgccgacctcgaacgactcgacgaactccgcgagcgc
cgcgaagaactcgctgagcgcgtggatgccctcgaatcgctccacgacgaggtctcgacg
ctcgaatcgacctacggcgacctccgggcggaactccgccagcggaacgtcgaagtgctc
gaacggatgctcaacgagacgttcgacctcgtgtacgccaacgacgcctactcgcgcatc
cgactcgacggcgagtacggcctgacggtgttccaaaaagacggcacggcgctcgaaccc
gagcagttgtcgggtggcgaacgcgccctgttcaacctcagcctgcgatgtgccatctat
cggcttctcgccgagggtatcgacggcgcggccccgctcccgccgctcattctcgacgaa
ccgaccgtcttcctcgacaccggccacgtctcacgactggtcgacctcgtcgaggacatg
cagaaccgcggcgtcaagcagattctcatcgtcagccacgacgacgaacttgtcggcgcg
gccgacgacctcgtccgcgtcgagaagaacccgacgacgaaccgctcgactgtcgagcgg
accgacgccccgacgctcgccagcgcgctcgcggacgactga
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