KEGG   Haloferax mediterranei: HFX_1410
Entry
HFX_1410          CDS       T02129                                 
Symbol
lhr
Name
(GenBank) ATP-dependent helicase Lhr and Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hme  Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:hme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hme03400]
    HFX_1410 (lhr)
Enzymes [BR:hme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HFX_1410 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     HFX_1410 (lhr)
DNA repair and recombination proteins [BR:hme03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HFX_1410 (lhr)
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 AAA_19 DEXQc_Suv3 HypA DmmA-like_C
Other DBs
NCBI-ProteinID: AFK19120
UniProt: I3R4G0
LinkDB
Position
complement(1326135..1328972)
AA seq 945 aa
MPDGEAAGMDAFTRLSQPVRNALSERGFTTPTEPQRRAIPPLAAGKNGLIIAPTGTGKTE
TAMLPVFSAIADAEDRFGISTLYITPLRALNRDMRQRLDWWGEQLDIDIDVRHGDTTQYQ
RQKQANDPPDVLVTTPETLQAMLTGKKLRKALSDVEHVVVDEVHELASAKRGAQLTIGLE
RLRELAGSFQRIGLSATVGSPAEVGKFLTGDRDFEIIEVDVDNRVEFDVVRPDVTNEDER
LAGKLATDPEIASHVRTIRDIVRDHQSVLVFVNTRQTAEALGSRFKALDDPIEVHHGSLS
KDVRIDVEDRFKAGELDALICTSSMELGIDVGRVDHVVQYNSPREVARLLQRVGRAGHRL
GVVSRGTIVTDHPDDTLEALAIARRAESGEVEPARVHHGSLDTVANQIVGIVMDYGDVSA
RRAYEIVTRAYPFRNLSEDDFRAVVRELSGNRLLWLDEEKDRLEKSGGTWQYFYANLSMI
PDEETYDVHDMSSRRQIGTLDEKFVLNFASPGATFIQRGEMWRVNDVDDEAARVNVSPIE
DPGGEVPSWVGSEIPVPAPVAGEVGELRDVAAPQFNSGADREHVARDVVMRYPTDEGTVS
TALGPIERQAEADASIPTADRLVLEGSPRKVTLNSCYGHRVNETLGRLLSALIGQRTGSS
VGMEVDPYRVEFDVPGNVSPTTFAEVLRETDPKHVEALLELALKRSDSLKFTLAQVAAKF
GALKRYQGKGRFGGDRLLAALEDTPIFDEAIREVFHTDLAVEEAVDLLRRIHDGDVELVV
AREPTPIGTGGRSSGTDLLVPENADASVIETIRERIQNDRVLLACLHCKEWTRKTKVKRV
RDPPTCPNCGATRVAALNPWDEEAVKAVRAPEKDDEQERLTKRAYRSASLVQAHGNKAVV
ALAARGVGPHNAARIINKLRDDDADFYRDILEREREYARTQSFWD
NT seq 2838 nt   +upstreamnt  +downstreamnt
atgccagacggcgaggccgccggaatggacgcctttacgaggctctcgcaacccgtccga
aatgccctctcggagcgcggattcacgacgccgaccgagccacagcgtcgtgcgattccg
ccgctcgccgctggaaagaacggtctcatcatcgcgccgaccgggaccggaaagacggag
acggcgatgctgccggtcttttcggccatcgccgacgcggaggaccgattcggaatctcc
acactctacattaccccgcttcgggcgctgaaccgcgacatgcgccagcgcctcgattgg
tggggcgaacaactcgacatcgacatcgacgttcgccacggcgacaccacgcagtaccaa
cgacagaagcaggccaacgacccgccggacgtgttggtgacgacgcccgagacgttgcag
gcgatgttgaccggaaagaagctcagaaaggcgctttcggacgtagaacacgtcgtcgtc
gacgaggtccacgaactcgcgtcggccaagcgcggcgcgcagttgaccatcgggttagag
cgtcttcgagaactcgcggggtcgttccagcgaatcggtctgtcggcgaccgtcgggtca
ccggcggaagtcgggaagttcctgactggtgaccgcgacttcgaaatcatcgaagtcgac
gtggacaaccgcgtcgaattcgacgtggttcgacccgacgtgacgaacgaggacgagcga
ttggcggggaaactcgccaccgaccccgaaatcgcgagtcacgtccggacgatacgcgac
atcgtccgcgaccaccagtcggtgctcgtcttcgtcaacacccgccagactgcggaagcg
ctcggctctcggttcaaggcgctcgacgaccctatcgaagtccaccacgggtcgctctcg
aaggacgtgcgaatcgacgtggaagaccgattcaaagccggtgagttggacgcgctcatc
tgtacgtcgtcgatggaactcggcatcgacgtgggccgggtcgaccacgtcgttcagtac
aatagtccgcgcgaggtcgccagactcctccagcgcgttggccgcgccggacaccggttg
ggtgtcgtctctcggggaaccatcgtcacggaccacccggacgacacgctcgaagcactc
gctatcgcccgtcgggccgaatcaggcgaggtcgaacccgcgcgcgtccaccacggcagc
ctcgataccgtagcgaaccaaattgtgggcatcgtcatggactacggcgacgtctcggcc
cggcgggcctacgaaatcgtcacgcgggcgtaccctttccgaaacctgtcggaagacgac
ttccgcgccgtcgtccgcgaactctccggtaatcggctcctctggctggacgaggagaag
gaccgcctcgaaaagtcgggcggcacgtggcagtacttctacgccaatctctcgatgata
cccgacgaggagacttacgacgtacacgacatgtcttcgcgtcggcaaatcggcaccctc
gacgaaaaattcgtcctcaacttcgcctcgccgggagcgacgttcatccagcgcggcgag
atgtggcgcgtcaacgatgtagacgacgaagcggcgcgggtgaacgtctcgcccatcgaa
gaccccggcggcgaggtgccgtcgtgggtcggctcggagattcctgttcccgcgcccgtg
gctggcgaggtgggcgaactccgcgatgtagcggcaccccaattcaactcgggtgcagac
cgcgagcacgtcgcccgcgatgtcgtcatgcggtacccgaccgacgagggaaccgtctcg
acggccttgggtcccatcgagcgacaggccgaggctgacgcgtcgattccgaccgccgac
agactcgtcctcgaagggtcgccacggaaggtgacgctcaactcctgttacggccaccgg
gtgaacgaaacgctcgggaggcttctgtcggcactcatcggccagcgcaccggctcgtcg
gtcgggatggaagtcgacccgtatcgggtcgagttcgacgtgccggggaacgtcagcccg
acgacgttcgccgaggtgcttcgggagacggacccgaaacacgtcgaagcgctgctcgaa
ctcgcgctgaagcgctcggactcgctgaagttcacgctcgcgcaggtcgccgcgaagttc
ggggcgctcaagcgctatcagggaaagggccgcttcggcggcgacagacttctcgcggcg
ctcgaagacacccccatcttcgacgaagcaatcagagaagtgttccacacggacctcgcc
gtcgaggaggcggtcgacctgctacggcgcatccacgacggcgacgtcgaactcgtcgtc
gcccgcgaaccgacacccatcggtaccggcggccggagttcgggaaccgacttgctcgtc
cccgaaaacgccgacgccagcgtcatcgagacgattcgagagcggattcagaacgaccgg
gtgctcctcgcgtgtctccactgcaaggagtggacgcggaagacgaaggtcaaacgcgtg
cgcgacccgccgacgtgtccgaactgcggcgcgacccgcgtcgccgccctcaacccgtgg
gacgaagaagcggtgaaagcggttcgagccccggaaaaagacgacgaacaggagcgcctg
acgaagcgggcctaccgctctgcgagtctggtgcaggcccacgggaacaaagccgtcgtc
gcgctcgcggcccgcggggtcggcccgcacaacgcggcccgaattatcaacaaactccgc
gacgacgacgcagacttctaccgcgacatcctcgaacgcgagcgcgagtacgcccggacg
cagtcgttttgggactga

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