Haloferax mediterranei: HFX_1631
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Entry
HFX_1631 CDS
T02129
Symbol
gyrA
Name
(GenBank) DNA gyrase / DNA topoisomerase II subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hme03032
]
HFX_1631 (gyrA)
03400 DNA repair and recombination proteins [BR:
hme03400
]
HFX_1631 (gyrA)
Enzymes [BR:
hme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HFX_1631 (gyrA)
DNA replication proteins [BR:
hme03032
]
Prokaryotic type
DNA Topoisomerases
HFX_1631 (gyrA)
DNA repair and recombination proteins [BR:
hme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HFX_1631 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF5832
Motif
Other DBs
NCBI-ProteinID:
AFK19337
UniProt:
I3R527
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All DBs
Position
1555994..1558558
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AA seq
854 aa
AA seq
DB search
MSSDAPDTFEPDAGIAAEVKNARIEDEMEQSYIDYAMSVIAGRALPDVRDGLKPVHRRIL
YAMHEAGVTAHSSHRKSSSIVGETMGDYHPHGDSAIYDALARMAQDFSMRYPLVDGQGNF
GSVDGDPPAAMRYTEARMSPIAEELLEDIDKDTVDFQSNYDDRMQEPTVLPSSFPNLLVN
GSSGIAVGMSTNIPPHNLGEVIDATVELIENSDATVTDLMEHVKGPDFPTGANIVGRNAV
HKAYKTGRGRVRVRADYDVFEEEGRIVINELPYQENKARLIERIADDVNAGKIEGIRDIR
DESDRDGIRVVIELKRGAMAEVVKNQLLDNHLESTFGVINLALVDGQPKVLTLKETLQHY
LDHRRDVVRRRSEYELAEAEDRAHILEGRLKALENIDNVVETIRNSESRDDAKAALRGEV
TVEVDGEALPSFDFSEDQANHIVSMQLGSLTSMEAAEIEDEYEEVEATIERLETILADQS
ELDAVIEEELLEIKDEYADERRTSFVANTGEVTRADLIPEEDVVVIVSEDDYIKRMPVSR
FRAQNRGGKGIIGTDLKEGDNVSSVFVTNTHDDLLCFTNHGQVYQLKAYQVPEMSRTARG
KSAVNLLDFDDGEEITAVVNCDDLEEVDGYLTMVTQSGYIKRTSVDNFQNILSTGIIATK
LDEGDELADVEVTDGTHDLVIGTEQGMSIRFHEDEVRAMGRSARGVRGIKLEDDDVVAGV
AAIDEDHHSWVLTVTENGYGKRTDIDAYRSQSRNGKGLIDIKANERNGPVCSINTVGEGD
HLVVMSDEGQILRTPVEDISTVGRNTMGVIVMDLDAGDTVASVDVIPPKMTTEEEELEDD
ADAEAEVEAVADEE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgacgcaccagatacattcgaacccgacgcgggcatcgcggcggaagtgaag
aacgcacgcatcgaagacgagatggaacagtcgtacatcgactacgcgatgtcggtcatc
gcgggtcgcgcactccccgacgtgcgcgacggtctcaagccggtccaccggcgtattctc
tatgcgatgcacgaggctggcgtgaccgcccactcgtcgcaccgaaagtcctcgtccatc
gtgggcgagacgatgggtgactaccacccgcacggcgactccgccatctacgacgccctc
gcgcgcatggcgcaggatttctccatgcgctaccccctcgtcgacgggcaggggaacttc
gggtccgtcgacggcgacccaccggccgcgatgcggtacacggaagcgcggatgtccccc
atcgccgaggaactcctcgaagatatcgacaaggacaccgtcgacttccagtcgaactac
gacgaccgcatgcaggaaccgacggtcctcccgtcgtcgttcccgaacctgctcgtcaac
ggttcgtcgggtatcgcggtcgggatgtccacgaacattccgccgcacaacctcggtgag
gtcatcgacgccaccgtcgaactcatcgagaattccgacgcgaccgtcacggacctgatg
gaacacgtcaagggccccgacttcccgaccggcgcgaacatcgtcggtcgaaacgcggtc
cacaaggcgtacaagacgggtcgcggccgcgttcgcgtccgcgccgactacgacgtgttc
gaagaggaaggccgcatcgtcatcaacgaactcccgtatcaggaaaacaaggcccgcctc
atcgagcgcatcgccgacgacgtaaacgccggcaaaatcgagggcatccgcgacatccgc
gacgagtccgaccgcgacggcatccgcgtcgtcatcgaactcaaacgtggcgcgatggct
gaagtcgtcaagaaccaactgctcgacaaccacctcgaatcgaccttcggcgtcatcaac
ctcgcactggtcgacggccaaccgaaggtcctcacgctgaaagagacgctgcaacactat
ctcgaccaccgccgtgacgtggttcgacggcgctccgagtacgaactcgccgaggccgaa
gaccgcgcacacatcctcgaaggccgcctgaaggccctcgaaaacatcgacaacgttgtc
gagaccatccggaactccgagagccgagacgacgccaaagccgcactccgtggcgaagtg
acagtcgaagtcgacggcgaggcgctcccgtcgttcgacttctccgaggaccaggcgaac
cacatcgtctcgatgcaactcggttcgctcacctcgatggaagcggccgaaatcgaagac
gagtacgaggaggtcgaagcgactatcgagcgcctcgaaaccatcctcgccgatcagtcc
gaactcgacgccgtcatcgaggaggaactcctcgaaatcaaagacgagtacgccgacgag
cgacggacctccttcgtcgccaacaccggcgaggtcacgcgtgccgacctcattcccgag
gaagacgtggtcgtcatcgtcagcgaggacgactacatcaaacgcatgcctgtctcccga
ttccgcgcccagaaccgcggcgggaaaggcatcatcggtacggacctaaaagaaggggac
aacgtctcgtcggtgttcgtcacgaacacccacgacgacctgttgtgcttcaccaaccac
ggacaggtctaccaactcaaggcctaccaggtgcccgagatgtcgcgaacggcccgcggg
aagtccgcggtcaatctgctcgacttcgacgacggtgaggagattaccgccgtcgtcaac
tgcgacgacttggaggaagtcgacggctacctgacgatggtaacccagagcggttacatc
aagcgtaccagcgtcgataacttccagaacatcctttcgacgggtatcatcgccaccaaa
ctcgacgagggcgacgaactcgccgacgtggaagtcacagacggcactcacgacctcgtt
atcggcaccgagcaggggatgtccatccggttccacgaggatgaagtccgcgcgatgggt
cgttcggcccgcggcgttcgcggcatcaaactcgaagacgacgacgtagtcgccggtgtc
gccgccatcgacgaggaccaccacagttgggtgctcaccgtcaccgagaacggctacggg
aagcgtaccgacatcgacgcctatcgctcgcagtcgcgcaacgggaaaggtctcatcgac
atcaaggccaacgagcgaaacggcccggtctgctctatcaacactgtcggtgaaggcgac
cacctcgtcgtcatgtccgacgaagggcagattctccggacccccgtcgaagacatctcg
acggtcggccgcaacacgatgggcgtcatcgtcatggacctcgatgcgggcgacaccgtc
gcctccgtcgacgtgattccgccgaagatgacgaccgaagaggaagaactcgaagacgac
gcggacgctgaggcggaagtcgaagcggtcgccgacgaagagtaa
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