Haloferax mediterranei: HFX_1768
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Entry
HFX_1768 CDS
T02129
Symbol
tfb7
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hme
Haloferax mediterranei
Pathway
hme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HFX_1768 (tfb7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hme03021
]
HFX_1768 (tfb7)
Transcription machinery [BR:
hme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HFX_1768 (tfb7)
Prokaryotic type
Archaeal type
TFB
HFX_1768 (tfb7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_RRN7
Sigma70_r4
A2L_zn_ribbon
Trm112p
BRF2-like_C_cyclin_rpt
Auto_anti-p27
DZR_2
Zn_ribbon_tTFIIB
DZR
HTH_Tnp_ISL3
Cyclin_N
DUF1272
Autoind_bind
Zn_ribbon_3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AFK19473
UniProt:
I3R5G3
LinkDB
All DBs
Position
1680194..1681189
Genome browser
AA seq
331 aa
AA seq
DB search
MSDITTRTYSTDAKARDVTSRESEQDERQEEEEQVCPECGGNLVQDDEHGETVCQECGLV
VEDTVVDRGPEWRAFDASERDSKSRVGAPTTKMMHDKGLSTNIGWQNKDAYGKSLSPRQR
EQMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALNDDLL
PGRSIEGVATAALYGAARMADTPRSLDELEKVSRVDKMELTRTYRYIVRELKLEIKPADP
EQYVPRFASELDLSDEAERQARQLLRDAKETGIHSGKSPVGLAAAAVYAAALLTNEKVTQ
SEVSKVADISEVTIRNRYKELLEVQDGSLLG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattaccacccgaacctacagtaccgacgcaaaggcccgggacgtaacctcc
cgcgagtccgagcaagacgagcgacaggaagaagaggaacaggtatgccctgagtgtggc
ggcaatctcgtccaagacgacgaacacggcgaaaccgtctgtcaagagtgtggtcttgtc
gtcgaggacactgtcgtcgaccgcggtcccgagtggcgcgcattcgacgcctccgagcga
gacagcaagtctcgcgtcggtgcgccgaccacgaagatgatgcacgacaaggggctttcg
accaacatcggctggcagaacaaagacgcctacggcaagtccctctcgccgcgccagcgc
gagcagatgcagcgtctccgtacttggaacgagcgcttccgcactcgcgactccaaggaa
cggaacctcaagcaggcactcggcgaaatcgaccgcatggcctcggccctcggtctcccg
gagaacgtccgcgagaccgcatcggtcatctaccgccgtgccctcaacgacgacctgctc
cccggccgttccatcgagggcgttgccaccgcggcgctgtacggtgccgcccgcatggcg
gacacccctcgctcgctcgacgaactggagaaagtctcccgcgtcgataagatggaactc
acccggacgtaccgctatatcgtccgcgagctgaagctcgaaatcaagcccgcggacccc
gaacagtacgtcccgcggttcgccagcgagctcgacctctccgacgaggcggagcggcag
gcacgacagctcctccgcgacgcgaaagagacgggtatccactccggtaagtcgccggtc
ggtctcgccgccgccgcggtctacgcggccgccttgctcaccaacgagaaggtgacccag
agtgaggtctcgaaagtcgccgacatctccgaagtgactatccgaaaccgctacaaggag
cttctcgaagtacaggacggaagcctgctcggataa
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