Haloferax mediterranei: HFX_1948
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Entry
HFX_1948 CDS
T02129
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
hme
Haloferax mediterranei
Pathway
hme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HFX_1948 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hme01007
]
HFX_1948 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hme03016
]
HFX_1948 (lysS)
Enzymes [BR:
hme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HFX_1948 (lysS)
Amino acid related enzymes [BR:
hme01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HFX_1948 (lysS)
Transfer RNA biogenesis [BR:
hme03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HFX_1948 (lysS)
SSDB
Ortholog
Paralog
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Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
AFK19644
UniProt:
A0ACM8RSN8
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All DBs
Position
complement(2714245..2715903)
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AA seq
552 aa
AA seq
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MTTDEASSVDVPDGTPESSDDHHDFWADDVADEIEARDPDEPVVIKGGVSPSGVAHLGNF
NEIMRGYFVAEVLRERGHEVRQVFTSDDKDPLRKLPRKLADADGNIVGLGEVDAGALGRN
LGKPYTSIPDPFGETDSYAAHFAALLKADADRLGVPVEMISNTKLYENGDFDPVVEHVLE
HIDTAREVLSEYQSKVDDDYVPFNPVCEACGKITETVTDIDLEAGTIEYTCTDMTVGDNT
IDGCGHDGTATFREGKLPWRFEWPGQWQVLGVDFEPFGKDHAEGSWPSGKDIAENVLEIE
PPVPMVYEWFTLNGKALSSSAGNIVTVPEMLELLEPEVLRYFFALNPRKARDLDLTRLDQ
LVDDFDRFERAYFGEVDDESLTRFAKRAYPFVVDDVREDRIRLPYTFAAVLGMTDDEDLR
VKMARNEGFFDDDTPEDVIDEALGRVERARRWAEKMDNQYNYRLQVELPEFDFEPAVESA
LDDLADFVAEGHDGEEIQGEIYETAREHDIEMGDFFAAGYRLFFDDTQGPRLGEFLGELE
QDFVVTRLRRED
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagacgaagcctcctccgtcgatgttcccgacggcacgcccgaatcgagtgac
gaccaccacgacttctgggccgacgacgtcgcggacgaaatcgaagcccgagaccccgac
gaacccgtcgtcatcaaaggcggcgtctctccgtccggtgttgctcacctcggcaacttc
aacgagattatgcgcggctacttcgtcgccgaagtactccgcgagcgcggtcacgaggtc
cgacaggtcttcacgagtgacgacaaggacccgctccgaaaacttccacgcaaacttgcc
gacgccgacggtaacatcgtcggactcggcgaggtcgacgccggtgcactcggccgcaac
ctcggcaagccgtacacctcgattccggacccgttcggcgagaccgactcctacgcggcg
cacttcgcggcccttctgaaggccgacgccgaccgtctcggcgtgccggtcgagatgatt
tcgaacaccaaactgtacgaaaacggcgatttcgaccccgtcgtcgagcacgtcctcgaa
cacatcgacaccgcgcgcgaggtgctcagcgagtaccagtcgaaggtcgacgacgactac
gtcccgttcaatcccgtctgtgaagcgtgcgggaagattacggagacggtcaccgacatc
gatctcgaagcgggcaccatcgagtacacctgtaccgacatgactgtcggcgacaacacc
atcgacggctgtggacacgacggaacggcgacgttccgcgagggtaagcttccgtggcgc
ttcgaatggcccggccagtggcaggttctcggcgtcgacttcgaacccttcggcaaggac
cacgctgaaggctcgtggccctcgggcaaggacatcgcggagaacgtcctcgaaatcgag
ccgccggtgccgatggtctacgagtggttcacgctcaacgggaaggcactctcctcgtcg
gccggaaacatcgtcaccgtcccggagatgctcgaactgctcgaacccgaggtgcttcgg
tacttcttcgcgctcaacccgcggaaggcccgcgacctcgacctgacgcgactcgaccaa
ctggtcgacgacttcgaccgattcgaacgcgcgtacttcggcgaggtcgacgacgaaagc
ctcacccggttcgcaaagcgcgcctacccgttcgtcgtcgacgacgttcgtgaggaccgt
atccgcctcccgtacaccttcgcggccgtcctcggcatgaccgacgacgaggacctgcgc
gtcaagatggcccgcaacgagggcttcttcgacgacgacacgcccgaagacgttatcgac
gaggcactcggccgggtcgaacgcgcccgccgctgggccgagaagatggacaaccagtac
aactaccgcctgcaggtcgaactccccgaattcgacttcgagcctgcggtcgagtcggcc
ctcgacgacctcgccgacttcgtcgccgaaggccacgacggcgaggagattcagggtgaa
atatacgagaccgcccgcgagcacgatatcgagatgggcgacttcttcgccgctgggtac
cgcctcttcttcgacgacacgcaggggccgcgcctcggcgagttcctcggtgagttagaa
caggacttcgtcgtgacgcgtctccgtcgcgaggactga
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