Haloferax mediterranei: HFX_2014
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Entry
HFX_2014 CDS
T02129
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hme
Haloferax mediterranei
Pathway
hme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HFX_2014 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hme01007
]
HFX_2014 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hme03016
]
HFX_2014 (serS)
Enzymes [BR:
hme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HFX_2014 (serS)
Amino acid related enzymes [BR:
hme01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HFX_2014 (serS)
Transfer RNA biogenesis [BR:
hme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HFX_2014 (serS)
Prokaryotic type
HFX_2014 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Sec10_N
DUF7307
ZapB
HalX
FapA
TPR_MLP1_2
PRTRC_E
APG6_N
Motif
Other DBs
NCBI-ProteinID:
AFK19706
UniProt:
I3R646
LinkDB
All DBs
Position
complement(2648429..2649811)
Genome browser
AA seq
460 aa
AA seq
DB search
MIDRQLLRDEPERVRDALAARNMEGVDVDHIIDVYDEWRTLKAEGDDLRHERNEVSQKIG
QLKQEGKDEEAQAAIDRSGELKEELQELEDRADELEAELDEALLELPNIPNESVPVGADE
SDNEEIRRVGFDDLRDLPDEVTPHYDLGEELDIIDEARAAKTTGSGFYFLKGEGAMLEHA
LIQFMLDVHREQDYVDLFPPVPVKTTSMVGTGQLPKFAEDAYRIGGSETENYEDDDLWLC
PTAEVPVTNMYRDEILLKDDLPLKHQAYTPNFRREAGEHGTETRGIVRVHQFNKVELVNF
VEPDESYDRLEALVDEAAEVLDRLGLPYRVLSLCTGDLTFASAKTYDLEVWAPGTESDDA
PELGGRWLEVSSASNFEDFQARRAGLRYRPERHESAEYLHTLNASGTAVGRIMVALLEYY
QNEDGTVDVPEVLQPYMGGREVIEGHEPVGESAVGAGKKD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgattgacaggcaactgctccgcgacgaaccggagcgagtccgcgacgcgctcgcggcc
cgaaacatggagggcgtggatgtcgaccacatcatcgacgtgtacgacgagtggcgtacg
ctgaaagccgagggagacgacctccgacacgagcgaaacgaggtcagccaaaaaatcggc
cagctaaagcaggagggcaaagacgaggaagcccaggcggccatcgaccgctcgggtgaa
ctcaaagaagaactacaggaactcgaagaccgcgccgacgaactcgaagcggaactcgac
gaagcgcttctcgaactccccaacatcccgaacgagtcggtcccggtcggtgcagacgag
tcggacaacgaggagattcgccgcgtcggcttcgacgacctgcgcgacctccccgacgag
gtgacgccgcactacgacctcggcgaggaactcgacatcatcgacgaggcgcgcgcggcg
aagacgaccgggtcgggcttctacttcctcaagggcgagggcgcgatgctcgaacacgcg
ctcatccagttcatgctggacgtgcaccgcgaacaggactacgtggacctcttcccgccg
gttccggtcaagacgacctcgatggtcggcaccggccaacttccgaagttcgccgaggac
gcctatcgcattggcgggtcggagaccgagaactacgaggacgacgacctgtggctctgc
ccgacggcggaggtgccggtcacgaacatgtaccgcgacgaaatcctcctgaaggacgac
ctcccgctgaagcatcaggcgtacacgccgaacttccgacgcgaggctggcgaacacggg
accgaaacccgcggtatcgtccgcgtccaccagttcaacaaggtcgaactcgtcaacttc
gtcgaacccgacgagtcgtacgaccgactggaagccctcgtcgacgaggcggcagaagtg
ctcgaccgactcggcctgccgtaccgcgtgctctcgctctgtaccggtgacctcaccttc
gcgtcggcgaagacgtacgacctcgaagtctgggcaccgggcaccgagtcggacgacgct
ccggaactgggcggtcgctggctcgaagtctcgtcggcctcgaacttcgaggacttccag
gcgcgccgagccgggcttcgctaccgccccgagcgccacgagtcggccgagtatctccac
acgctcaacgcgtcggggacggccgtcggccgaatcatggtcgcgctgctcgaatactac
cagaacgaggacggcacggtcgacgtgcccgaagtcctccagccctacatgggcggccgc
gaagtcatcgagggtcacgagccggtcggtgaatcggcagtcggcgcgggcaagaaggac
tga
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