Haloferax mediterranei: HFX_2034
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Entry
HFX_2034 CDS
T02129
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hme
Haloferax mediterranei
Pathway
hme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HFX_2034 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hme03400
]
HFX_2034 (mutS)
DNA repair and recombination proteins [BR:
hme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HFX_2034 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFK19726
UniProt:
I3R666
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Position
2629871..2632630
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AA seq
919 aa
AA seq
DB search
MNSDAQREAVYGAPPEMLEVRDDLTPMLSQYADLCETHDDAVVLFQVGDFYEAFCGAAKA
VARTCEVTLTKREDSTGTWPMAGIPIDNAAGYLERLLDAGYRVALAEQVEDASEASGLVD
RAVTQLITPGTVVDEELLEAGRATYLGAVAKSSKNRSDDEYGIAVVDVSTGECLVTGADR
ALALEELERLAPAELVVGPNCDLPSLSFDPMQTPFEPEAFEPGAARETLSQYAPRPEAVV
DSDAELRAVGALLAYAEYAQGDSKLEYVTRVTRFDPREFLQLDATAIQSLELFDSRSTRA
GSTLFSVLDETACALGRRRLEAWLRRPLVDREAIEARLDAVDALCDDALSRADLRDHLSS
VYDLERLVARVSRERANARDLRSLKTTLDRVPEIRESLAETDSALLSKLRDSLDELECVR
DLVGRAIVTDPPQEITEGGVIADGFNAELDDLRGTAEDGREWVSNLEVQERERTGIDSLE
VGYNQVHGYYIEVTNPNLDRVPDDYVRRQTLKNSERFYTPELKEREDEILRAADRADALE
YDLFCEVRADVATESERIQAVADVLADLDVLRTLADVAVANDYARPEFHGGSAGGGENTS
NAKFDGEGIEIDAGRHPVVERAQGEFVPNPASIPQGGVALITGPNMSGKSTYMRQVALVC
ILAQMGSFVPADAARLPVVDRVFTRIGASDDIAGGQSTFMREMSELTEILHNATDDSLVL
LDEVGRGTSTADGLAIARAATEFVHDEVGAMTLFATHYHDLTDAAADRDGVFNLHFTATQ
RDGEVTFLHSVADGPSSSSYGVEVAHLAGVPSTVVDRARNLVEEDVSNEAEMNTVGAAAN
GKAGATDHTETAGDGTLAAYVDGLENGHSEGETRDVAKSNAEPAPELEVVADRLREADLV
DTTPLEALNLLSELKGHLE
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggacgcccagcgcgaggcggtgtacggcgcaccgccggagatgctggaagtg
cgagacgacctgacgcccatgctctcgcagtacgccgacctctgtgagacccacgatgac
gcggtcgtactgttccaggtcggcgacttctacgaggcgttctgtggtgcggcgaaagcg
gtcgcacgaacctgtgaggtcacgctcaccaagcgcgaggactcgaccgggacgtggccg
atggccggcattcccatcgataacgcggcgggctacctcgaacgactgctcgacgcaggc
tatcgcgtcgcgctcgccgagcaggtcgaagacgcctcggaagcctccggcttggtggac
cgcgccgtcacacaactcatcacgccggggaccgtcgtcgacgaagagctactggaagcg
ggacgggcgacctacctcggcgcagtcgcaaagagtagcaagaacagaagtgacgacgaa
tacggcatcgccgtcgtcgatgtctcgaccggtgagtgtctcgttacgggcgctgacagg
gccttggcactcgaagaactggaacgcctcgcgcccgccgaactcgtcgtcgggccgaac
tgcgacctgccgtcgctctcgttcgacccgatgcaaacgccgttcgaaccggaagcattc
gagccgggagcagcgagagagacgctttctcagtacgcgccgcgccccgaggccgtcgtc
gactctgatgcagaactccgggcggtcggcgcgctcctcgcctacgcggagtacgcacag
ggcgattcgaaactggagtacgtgactcgggtgacgcgcttcgacccccgtgagttcctc
caactcgacgcgacggccatccagagcctcgaactgttcgactcgcggagcacccgcgcc
ggaagcacgctcttttcggtcctcgacgagacggcctgcgcactgggtcgccgccgactc
gaagcgtggcttcgtcgcccgctcgtagaccgcgaggccatcgaggcgcgactggacgcg
gtggacgccctctgcgacgacgcgctctcgcgggccgaccttcgagaccacctctcgtcg
gtctacgacctcgaacgtctggtcgcccgggtctcgcgcgagcgagcgaacgcccgcgac
cttcgctccctgaagacgacgctcgaccgcgttcccgaaattcgcgaaagtctcgcagag
accgactccgcgctcctctccaaactccgtgactcgctagacgaactcgaatgtgttcgc
gacctcgtcggtcgcgcaatcgtcaccgacccgccgcaggagattaccgaaggcggcgtc
atcgccgacgggttcaatgccgaactcgacgacctccgcggcaccgccgaagacggccgc
gagtgggtttcgaacctcgaagtacaggagcgcgaacgaaccggcatcgactccctcgaa
gtcggctacaatcaggtccacggctactacatcgaggtgacgaatccgaatctcgaccgc
gtgcccgacgactacgtccgccgccagacgctgaagaactccgagcgcttctacacgccc
gaattgaaggagcgcgaagacgagattctccgggccgccgaccgggccgacgccctcgaa
tacgacctcttctgcgaggttcgcgccgacgtggccacggaatcggagcgcatccaagcc
gtcgcggacgtgttggccgacctcgatgtgttgcgcaccctcgccgacgtggccgtcgcc
aacgactacgcccggccggagttccacggcggtagtgctggtggcggcgagaacacgtcg
aacgcgaagttcgacggagaaggcatcgagatcgacgccggaagacaccctgtcgtcgag
cgcgcccaaggcgagttcgtcccaaatccggcgtcgattccacagggcggcgttgcgctc
atcactggaccgaatatgtccggcaagtcgacgtacatgcggcaggtggcgctcgtctgc
atcctcgcccagatggggagtttcgtccccgccgatgcggcccggttgccggtcgttgac
cgcgtgttcacccgcatcggtgcctctgacgacatcgcgggtggccaatcgacgttcatg
cgcgagatgagcgagttgaccgagattctccacaacgccaccgacgactcgctcgtcctc
ctcgacgaggtcggccgcggcacctcgacggccgacgggttggctatcgcccgcgccgca
accgagttcgtccacgacgaagtcggcgcgatgacactcttcgccacacactatcacgac
ctgaccgacgccgccgccgaccgcgacggcgtgttcaacctccacttcaccgccacccag
cgcgacggcgaggtcaccttcctccacagcgtcgccgacggtccctcgtcgtcctcgtac
ggggtcgaagtggctcatctggcgggcgtcccctcgaccgtggtcgaccgtgcgcggaac
ctcgtggaagaagacgtatctaacgaggccgaaatgaacacggtcggtgctgccgcgaat
ggaaaagccggagcaaccgaccataccgaaacagccggagacgggacgcttgcggcgtac
gtcgatggactggagaacggccacagcgagggagaaactcgtgacgtggcgaaatcgaat
gccgagccggctcccgaactcgaagtcgtcgccgaccgactccgcgaggctgatttggtt
gataccaccccactggaggcgctcaacctcctctcggaactcaaaggccacctcgaatga
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