KEGG   Haloferax mediterranei: HFX_2167
Entry
HFX_2167          CDS       T02129                                 
Symbol
tbp3
Name
(GenBank) TATA-binding transcription initiation factor
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hme  Haloferax mediterranei
Pathway
hme03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HFX_2167 (tbp3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hme03000]
    HFX_2167 (tbp3)
   03021 Transcription machinery [BR:hme03021]
    HFX_2167 (tbp3)
Transcription factors [BR:hme03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    HFX_2167 (tbp3)
Transcription machinery [BR:hme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     HFX_2167 (tbp3)
  RNA polymerase III system
    TFIIIB
     HFX_2167 (tbp3)
  RNA polymerase I system
    SL1/TIF-1B
     HFX_2167 (tbp3)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-ProteinID: AFK19856
UniProt: I3R6J6
LinkDB
Position
2483314..2483880
AA seq 188 aa
MSHEARLESLEIQNVVASTAVGQELDLESLSMDLVGADYDPDNFPGLVYRTQEPKAASLI
FRSGKIVCTGASSVDDVDRALEQVFGELSKLGIPTEDREEATIQNIVSSADLGTTLNLNA
LAIGLGLEDVEYEPEQFPGLVYRIDEPSVVVLMFGSGKIVITGAKQVEHAREAINVVTDE
IDSLGLLG
NT seq 567 nt   +upstreamnt  +downstreamnt
atgtcgcacgaagctcgtctcgagtctcttgagattcagaacgtcgtcgcctccacggcc
gttggtcaggagttagacctggaatcgctttcgatggacctcgtcggcgcggactacgac
ccggacaacttccccggactcgtttaccgcacgcaagagccgaaagcagcgagtctcatc
ttccgctcgggtaagattgtgtgtactggcgcgagcagcgtcgacgatgtcgaccgagcg
ctcgaacaagtcttcggggaactgagtaaactcggtatcccaactgaggaccgcgaagaa
gccacgattcagaacatcgtctcgagtgccgacctcggaacgacactcaacctgaacgcg
cttgctatcggacttggtctcgaagacgtcgaatacgaacccgaacagttccccggtctc
gtctaccgaatcgacgaaccgagtgtggttgtcctgatgttcggctccggtaaaatcgtc
atcacgggagccaaacaggtcgaacacgcgcgcgaggcgattaacgtcgtcaccgacgaa
atcgactcgctcggtctgctcggctaa

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