Haloferax mediterranei: HFX_2220
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Entry
HFX_2220 CDS
T02129
Name
(GenBank) hypothetical protein
Organism
hme
Haloferax mediterranei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARDB
Big_3_3
FlgD_ig
Big_7
Y_Y_Y
PGF-CTERM
Big_13
HYDIN_VesB_CFA65-like_Ig
CopC
SoxY
HupF_HypC
Motif
Other DBs
NCBI-ProteinID:
AFK19909
UniProt:
I3R6P9
LinkDB
All DBs
Position
complement(2421679..2428416)
Genome browser
AA seq
2245 aa
AA seq
DB search
MSRYRRLSQQGLSLAFTLIMVISVFAGPVSASLGSATHEVQPGGPPAQQLDTVPSDQLTT
ASENISVWDGAFLTLRPNTSDSRFDSAQAYKVKTVDTFVKSSVANKDLQKNPVYVYNAGS
EVPFTFEGVSNDQLIDGKEVQLVAAKMEKGASVPRNISAVAQKLTNDEDVTASVVGSTTG
TENENSFSFTPNESGLWMFAVATVDDGTGFSDTDSDGNLETNGNVTFVGVDALPVHEGSS
SVDVPELAGNGQNVTVSVDASSLDASEVTHTVAIFNESDLTKYDQTINATDRSNITLETE
IARVNGTGDIPSNANIMGVAPGSQSYSGSVTALSVFERFNNSTSNFDNISVVGPKATVHG
SAVAKVAGNQTTVEVPIADDAPAGEYVVMHVATNQSGTNSVTDREPLQVAESVQLNLTAN
TTSPLAGNDVKFTVTREDTGATVEDANVTVDGTSMQTNANGVATVPVDTSGTLTATVSKA
VAGGEVFADDTLALDVQSPATFEYSNLTVEPRQVLPGSNVTVNATIENVGDIAGSYNATL
VVDGTAQTSSTGNLTPGQSTTVSFTKTFNTAGSYNVTIDERSTESDELISKSVRVVAAAN
SSVTNVSVAPSTIDTAERYSITATVENTGGLSDVVDLTYTVSNESTEEVYNTTQTLVVGP
DATEQKTVSTLAPQELGSDDIENFTVEVNDVEANTKLTVAKSDRLPPTIRLQTPSQGLTP
YGTPINLSVTDGSGVDSATYSFGNDSKTLSLDANGTATIATDSLEEGQKTLTVTATDTEG
NELTRTFEFDFVSSPRIKSVTPTDVVGPSSTINATFADNRHGSSETGINASATTLVIDGQ
TVDLSGATTNTESALEIDFSELGVSLTEGEMTAKLTVEDDAGHATSRLFTFEYDETKPTA
DLSTDISEHVSANNTVNVTLDAGDANLETAQFVVEDSNGDAVYTRDVTTLAQASDDSFVV
EWDATDDSGNKLSNGNYNLTLVSTDAGDNSQVGNATVSVDNNLPTYDLASIDGTDSTVYT
NDSVNVTYSTDENVTIVYTLESETGVKKTFTRTSGQTSGADHTLDVTSALSDGTYSVKAT
VTDEANNERVVTRNNPVVVDTTKPGIAATLDFNEATGNLTVNVTSTESLATTPDAEVTYP
NSNTEALTLTKVGSTTWTDELDTNASGEYTLDVSGTDLAGNSASDTSTSKVEGHNFSDDK
TVLLVSASGDTFIHINASDSANLPDGQTVITLSDTNVPPNALSQGTAATRYLEANSGLSD
DQIEEVSYGFSEDLDTTGQGFYITYIENGGTKVLPTERQTDPFGLNGDYYVGTRGGLSTY
GAMVNDTTAPTITFDTPAEGATFNETENTVDVNATLSDDVEVNESSVTVTLDNGTDSMDV
TGSAAITNESVNYTTHALAPGDYTVTIEASDTNLTANTATEQVNFTIEDDREAPSFTSFN
PTEGETFPFGTSEFRLNATYEEASDAVNDTGIDTRNITVLYDGEDITSAADVTASGFDTN
VTVSDTETHNLTVRVPDKAGNSIEQTTNFSVTADDTDPAVEITNPAEGDELSNTTTYANV
TATVSDAESGVNLSSVAVTFDGTEVTSAANLDDLSNIWFNKTGLEPGTSHTVVVSAADAD
GNVNQSTVNFTVAPDETAPEITRVSSKDQTFDSTGTLAIEVNYTDPESGIDASAVTLLLD
GEDVTENATVHPNPGASLELSSSDIGSGEHQLGVHVTNNNGDLTANETTFSVSQGSDIQV
TNAGLNTTDVQINDPVEVSATVENFGDEDGTMALGVTGESQAGTTDFGVTKSVEVNASES
KSVNFVITPDDAGTYSVMVNGTTTTNALTVTSPNADIQVLSESSVSPTTLLENEETTVTV
TLGNLGGSGGTISGDVTRNGSTVYQIPSTTIASGAKKTFTFTDTPPSTGDYVYTFNGAEV
GTVTVSQRAPSFSVDAGSSSISEQTVKPDETFTVSVDVDNVGTARGTFSKALKANGTALA
TESVTLDAGGSSTLTYSTSIDSDGNYTLTVDGVTLGTITVKTPTTGGGGGGGGGDDADDA
YESGRLFHETQFDAPLKGGESVSAANITFSNETTGQVTVEERTSVPGIVGEPAETAVGYV
KIQVPASARDEPSTLTFSVRQSRLDDLDLSASDLQVQRFNGDTGEWEALDTRVVNESSDT
VVLEAETPGFSYFAITSKQVTTTTTEPPTTTTTEPPTTTDEPPTTDESPTTTGEPATTGT
GVPGFGAVLAVIALLAVALIAVRRD
NT seq
6738 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctaccgcaggctctcccaacaagggttgagtctcgcattcacactcataatg
gtaatctcggtctttgcaggccccgtatctgcaagtctcgggagtgccacacatgaggta
cagccaggcggaccacccgcccaacaactggataccgttcccagtgaccaactgactact
gcatccgaaaacatcagtgtctgggacggcgcgtttctcacgcttcggccgaacacgtcc
gactcgcggtttgattcggcccaggcgtacaaggtcaagactgtcgacacgttcgtcaaa
tcgagtgtcgccaacaaggaccttcagaagaaccccgtctacgtctataacgccggttcg
gaggttcccttcaccttcgaaggcgtttcgaacgaccagctaatcgacgggaaagaagtc
caactcgtcgcagccaagatggaaaagggtgcctcggtgccccgaaacatctccgctgtt
gcacagaaactcaccaatgacgaggacgtgaccgcgtctgtcgtcggctcgacaactgga
accgaaaacgagaattcgttctcgtttacgcccaacgagtccggcctctggatgttcgcg
gtcgccaccgtcgatgacggtaccggtttctccgacaccgactctgacggtaacctcgaa
acgaacgggaacgtcaccttcgtcggcgtcgacgccctccccgtccacgaaggctcgtcg
tcagtagacgtcccagaactcgctggcaacggccagaacgtgacagtctccgttgacgcc
tcgtcgctcgatgcgtccgaggtcactcacacggtcgccatcttcaacgagtccgacctc
acgaagtacgaccagactatcaacgcgacggaccgctcgaacatcacgctcgagaccgaa
atcgcgcgggtcaacggcacgggtgacatcccgtccaacgcgaatattatgggcgtcgcc
cccggctcgcagtcgtactccgggagcgtgacggccctgtcagttttcgagcgcttcaac
aactccacctccaatttcgacaacatctcggttgtcggcccaaaggcgacggttcacggc
tctgccgtggcgaaggttgcgggtaaccagacaaccgttgaagtccccatcgctgacgac
gcccccgcgggcgagtacgtcgtgatgcacgtcgcgacgaaccagtccgggacgaactcg
gtgacggaccgagaaccgctgcaggtcgcagagagtgtccaactcaacctgacggcgaac
acgacgtccccgctcgcaggcaatgacgtgaaattcactgtcacgcgcgaagacaccggc
gcgacagtcgaagacgcgaacgtcacggtcgatggaacgagcatgcaaacgaacgccaac
ggtgtggcgacggtccctgtcgacacgtccgggacgctcaccgcaaccgtctcgaaagcg
gttgccggtggcgaagtgtttgctgacgacacgctcgcactcgacgtgcagtcacccgca
acgttcgaatacagtaacctgaccgtcgaaccgcggcaggtcctccccggttccaacgtg
accgtgaacgcgaccatcgagaacgtcggcgatatcgcaggaagctacaatgcgacactc
gtcgtcgacgggaccgctcaaacctcgtcgaccggtaacctgacgcccggtcaatcgacg
acggtgagcttcacgaagacgttcaacaccgccggtagctacaacgtcactatcgatgaa
cgctcgaccgagagcgacgaactcatctcgaagtccgtccgcgtcgtcgcggccgcaaat
tcgagtgtgaccaacgtgtcggtcgctccgtcgactatcgacaccgccgagcgctactcg
atcaccgcgacggtcgagaacaccggcggactctcggacgttgtcgacctgacgtacacc
gtctccaacgaaagtacggaagaagtctacaacaccacgcagacgctcgtcgtcggtccc
gacgcgaccgaacaaaagaccgtctcgacgctcgccccgcaggaactcggctccgacgac
atcgagaacttcaccgtcgaagtcaacgatgtcgaggcgaacacgaagctgacggtcgcg
aagtccgaccggcttccgccgacgattcgactccagacgccgtcgcaggggctgaccccg
tacggcacgcccatcaacctctccgttactgatggctcgggcgtcgactcggcaacctac
agcttcggtaacgactcgaagacgctctcgctcgacgcgaacggcaccgcgactatcgcg
accgactcgctcgaagagggtcagaagacgctcaccgtcaccgcgacggacacggagggt
aacgaactcacgcggaccttcgagttcgacttcgtctcctcgccgcgtatcaagagcgtc
accccgacggacgtcgtcggtccgtcgagcactatcaacgcgacgttcgccgacaaccgc
cacggtagctcggagacgggcatcaacgccagcgcgacgacgctcgtcatcgacgggcag
accgtcgacctctcgggtgcgacgaccaacaccgagtccgcgctcgaaatcgacttctcc
gaactcggcgtctcgctgaccgaaggcgagatgaccgcgaagctcacggtcgaggacgac
gctggtcacgcgacctcgcgtctgttcaccttcgagtacgacgagacgaagccgacggct
gacctctcgacggatatctcggagcacgtgagcgccaacaacacggttaacgtcacgctc
gacgccggggatgcgaacctcgaaaccgcacagttcgtcgtcgaagactccaacggcgat
gcggtctacacgcgcgacgtgacgacgctcgcacaggcgagcgacgactcgttcgtcgtc
gagtgggacgccactgacgacagcggtaacaaactctccaacggcaactacaacctcacg
ctcgtgagcaccgacgctggtgacaacagccaggtcggcaacgcgaccgtctctgtcgac
aacaacttgccgacgtacgacctcgcgtccatcgacggcaccgacagcacggtctacacg
aacgactcggtcaacgtcacgtacagcactgatgagaacgtcaccatcgtatacacgctg
gagtctgaaaccggcgtgaagaagacgttcacgcgaacgtcgggccagacgtccggtgcg
gaccacacgctcgacgtgacgtccgcactctcggacggcacctacagcgtgaaagcgacg
gtcaccgacgaagcgaacaacgagcgcgtcgtcacccggaacaacccggtcgtagtcgac
acgacgaagcccggaatcgcggcaacgctcgacttcaacgaggcgacggggaacctcacc
gtcaacgtgacgagcacggaatcgctcgccacgacgccggacgcagaggttacgtacccc
aattcgaacacggaagccctgacgctcacgaaggtcggctcgacgacgtggaccgacgaa
ctcgacacgaacgcgtccggcgagtacacgctggacgtttccggaaccgacctcgccggc
aactcggcgagcgacaccagcacctcgaaggttgagggtcacaacttctcggacgacaag
accgtcctcctcgtgagtgcgagcggcgacacgttcatccacatcaacgccagcgactcg
gcgaacctgccggacggccagacggtcatcacgctgtccgatacgaacgttccgccgaac
gcgctctcacagggcaccgcagcaacgcggtacctcgaagcgaactccggactgtccgac
gaccaaatcgaggaagtctcctacggcttcagcgaagacctcgacacgacgggacagggc
ttctacatcacctacatcgagaacggtgggacgaaggtcctcccgactgagcgccagacc
gacccgttcggtctcaacggtgactactacgtggggacccgcggtggactgtccacctac
ggtgcaatggtgaacgatacgaccgcgccgacgattaccttcgacactccggccgaaggc
gcaacgttcaacgagaccgagaacacggtcgacgtgaacgccacgctctcggacgacgtc
gaagtcaacgaatcgtcggtcacagtcacgctcgacaacggcaccgacagcatggacgtc
actggctcggcggctatcaccaacgagtcggtgaactacacgacgcacgcgctggcaccc
ggtgactacacggtgaccatcgaagcgtcggacacgaacctcacggcgaacacggcgacc
gagcaggtcaacttcaccatcgaagacgaccgcgaagcgccgtcgttcacttcgttcaac
ccgaccgaaggggagacgttcccgttcggaacgtccgagttccgcctcaacgcgacctac
gaggaagcaagcgatgcggtgaacgacaccggcatcgacacgcggaacatcaccgtcctc
tacgacggtgaagacatcaccagcgcggccgatgtcacggcaagcggattcgacaccaac
gtcacggtaagcgacaccgagacgcacaacctgacggtccgcgtgcccgacaaggccggt
aacagcatcgaacaaacgacgaacttcagtgtcacggctgacgacactgaccccgcagtc
gagattacgaaccccgcagagggcgacgaactctcgaacacgacgacgtacgcaaacgtc
acggcgaccgtgtcggacgctgagagcggtgtgaacctcagctcagttgcggtcaccttc
gacggcacggaggtcacgagcgcggcgaacctcgacgacctctcgaacatctggttcaat
aagacgggtctcgaacccggcacgagccacacggtcgtcgtctccgcggccgacgcggac
ggcaacgtcaaccagtcgacggtcaacttcacggttgcccccgacgagaccgcgccggaa
atcacgcgagtgagctcgaaggaccagaccttcgacagcactggcacccttgctatcgaa
gtgaactacaccgaccccgagagcggtatcgacgcctccgcggtgacgctactgctcgac
ggcgaggatgtcactgagaacgcgaccgtccatccgaaccccggtgcctcgctcgaactc
agttcgagcgacatcggctccggtgagcaccaacttggtgtccacgtcaccaacaacaat
ggtgacctgacggcgaacgagacgacgttctcggtcagccagggttcggacatccaggtc
acgaacgctggtctcaacacgaccgacgtacagattaacgacccagttgaagtgagcgcc
accgtcgagaacttcggcgacgaggacggtacgatggctctcggcgttaccggcgagagt
caggccggcacgaccgacttcggcgtcacgaagtccgtcgaggtcaacgcctccgaatcg
aagtccgtgaacttcgtcatcacgccggacgacgcaggtacctacagcgtcatggtcaac
ggaacgaccacgaccaacgcgctgacggtcacctcgccgaacgcggatatccaggtgctc
agtgagtcgtcggtcagtccgacgacgctccttgagaacgaggagacgaccgtcacggtc
accctcggcaacctcggtgggtcgggcggaaccatctcgggtgacgtgacccgaaacggt
tccactgtctaccagatcccgagcacgacgattgcctcgggtgcgaagaagacgttcacc
ttcaccgacacgccgccgtcgaccggtgactacgtctacaccttcaacggcgctgaagtt
ggaacggttaccgtctcccaacgcgcgccgtccttcagcgtcgacgccggttcgagttcc
atctcggagcagacggtcaaaccggacgagacgttcaccgtctcggtcgatgtcgacaac
gtcggtaccgctcgtggaaccttcagcaaggccctgaaggcgaacggaaccgcactcgca
accgagagcgtcacgcttgacgctggcggctcgagtacgttgacgtactccacgtcgatt
gactctgacgggaactacaccctcacggtcgatggcgtcacgctcggaacgattaccgtc
aaaaccccaaccaccggcggtggcggtggcggcggcggtggtgacgacgcggacgacgcc
tacgagagcggccgtctcttccacgagacgcagttcgacgcgccgctgaagggtggcgag
tcggtctccgctgcgaacatcaccttcagcaacgagacgactggtcaggtcaccgtggaa
gaacggaccagcgtccccggaatcgtcggtgagcctgcggaaaccgcggtcggctacgtc
aagattcaggttcccgcttcggcacgcgacgaaccgtcgacgctcacgttctcggtcaga
cagagcagactggacgacctcgacctgagcgcgtcggaccttcaggtccaacggttcaac
ggcgacaccggcgagtgggaagcactcgacacgcgcgtggtcaacgaatccagcgacacg
gtcgttctcgaggctgaaacgcccgggttctcctacttcgccatcacgtcgaagcaggtg
acgaccacgacgaccgaaccgccgacgaccacgacgactgaaccgccgacgacgaccgac
gaaccgccgacgacggacgaatcgcccaccacgacgggtgaaccggccacgacgggtact
ggcgtccccggcttcggtgccgtgctcgccgtgattgcgctgctcgcggtcgcactcatc
gcggtgcgccgcgactag
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integrated database retrieval system
