Haloferax mediterranei: HFX_2277
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Entry
HFX_2277 CDS
T02129
Symbol
mscS
Name
(GenBank) putative mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hme02000
]
HFX_2277 (mscS)
Transporters [BR:
hme02000
]
Other transporters
Pores ion channels [TC:
1
]
HFX_2277 (mscS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
NeuB
Herpes_glycop
MS_channel_1st_1
SseC
Motif
Other DBs
NCBI-ProteinID:
AFK19964
UniProt:
I3R6V4
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All DBs
Position
complement(2365880..2366782)
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AA seq
300 aa
AA seq
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MDDCRRNMVLLQQGFALDPQQYVPQLVSAVTTVVLFVVVFAVIYLFGKSFVTRVVEEGLR
RRDFDETIIGLAMSTTTVVTAVVAVALAATVAGFGVVLAAFATLGGALALAVGFAAQDLI
ANFVAGVFIIQDEPFTVGDWIEWNGNSGVVRDIQLRVTRLDTFDNELVTVPNSDLANAAV
VNNVANDQRRVSVGFGIGYDDDIEQARDAIVEEGSRIEGVLDDPEPTAPVTELGDSAVVL
SGRLWIDPDESSYGAVRAQFVEAVKERFDAEGIDMPYPNTELSGGVEVTNVGEGAGATSD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggatgattgtcgaaggaatatggtcttacttcaacaggggttcgcgctcgacccacag
cagtacgtcccgcaactcgtcagtgcagtcacgacggtcgtgttgttcgtcgtcgtgttc
gccgtcatctatctgttcggaaagtccttcgtgacccgggtggtggaagaaggcctcaga
cgtcgcgacttcgacgagacgattatcgggcttgcaatgagcaccaccaccgtcgtcacc
gccgtcgtcgcagtcgcgctggccgcgacagtcgctggcttcggtgtcgtcctcgcggcg
tttgcgacgttgggtggtgctctcgccctcgcagtcgggttcgctgcacaggacctcatc
gccaacttcgtcgctggcgtgttcatcatccaagacgaaccgttcaccgtcggtgactgg
atcgagtggaacggaaacagcggtgtagtccgcgatattcaactgcgtgtgacgaggctg
gacacgttcgacaacgaactggtcaccgtcccgaacagcgacctcgctaacgcggcagtg
gtcaacaacgtggcgaacgaccagcgtcgggtgtcggtgggattcggcatcgggtacgac
gacgacatcgagcaggcacgcgatgccatcgtcgaggaagggtcgcgcatcgagggcgtc
ctcgacgaccccgagccgacggcccccgtcacggaactgggcgactcggcggtcgtcctc
tcgggtcgactctggattgacccggacgaaagtagttacggcgcggtgcgcgcgcagttc
gtcgaggcggtcaaggagcgcttcgacgcggaaggaatcgatatgccgtaccccaacacg
gaactctcgggcggcgtcgaagtcacgaacgtcggtgagggtgcgggggcgacgagcgac
tga
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