Haloferax mediterranei: HFX_2446
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Entry
HFX_2446 CDS
T02129
Symbol
dppA
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hme
Haloferax mediterranei
Pathway
hme02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HFX_2446 (dppA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hme02000
]
HFX_2446 (dppA)
Transporters [BR:
hme02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HFX_2446 (dppA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AFK20131
UniProt:
I3R7C1
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All DBs
Position
complement(2198689..2200314)
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AA seq
541 aa
AA seq
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MADNNSHINRRSYLKLAGGAAASAALAGCTGDDGEGTETTTTAGGGNETETTTTPSENGD
TFDVTITQGQMPSGLDPHDHRETPTTIVVLHAYEGVLTRDADGAVQTALATNYERIEGEN
AVRFDLREGVTFHNGDELTPEDVAYSINRVVDEEVGFASPQSDQLAGVAGAEAIEGENAV
KVNNDGLNPIVFSEFATYLDVMQQSWVENNDKSYIAQNVNGTGPFKLDSYTEDEVVVFSA
YEEYWQERAAVDTLTFRAASEASTRVNQLLQGETDVIVNVPPQEVSRINNSDNASIAAAP
STRIIYNGLRYDLEPFDSVKFRQALNYAIDLESIVQNILGGFGAQTGQPTLPEFVGHNPD
IDPYPYDPDMAEQLVEESGYAGAEIELNTPVGRYLKDLEVAQAVVGYIDELPNVTATVRQ
RDFGSLVDELLAGSIEKRPPWFLIGWGEATFDGGLVMEALLASDGTLTTWKNDEFDSLLE
QAGNQSGEEREATLQEANALAHEQAPWIFLNQQFSVYGVNNAIKWEPRSDERIDAYAMSQ
P
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacaattcacacattaatcgccgctcatacctcaaattagcaggcggcgca
gcggcctcggctgcactcgccggctgtaccggtgatgatggtgaagggacagagacgacg
actacagccggtggggggaacgagactgagacgaccacgacgccgtcggaaaacggcgat
acgttcgatgtgacgattacacaggggcagatgccgtccggtctcgacccgcacgaccac
cgcgaaacaccgacgactatcgtcgtcttgcacgcgtacgagggcgtgttgacccgcgac
gccgacggcgcagtacagaccgcgctcgcaacgaactacgagcgaatcgagggcgaaaac
gcggttcggttcgacctccgcgagggcgtcaccttccacaacggcgacgaactcactccc
gaagacgtggcgtacagtatcaaccgcgtcgtcgacgaggaagtcggcttcgcgagccca
cagagtgaccaactcgccggtgtcgccggtgcggaggcaatcgagggcgaaaacgccgtc
aaggtgaacaacgacggcctgaaccccatcgtgttctccgagttcgcaacctacctcgac
gtgatgcaacagtcgtgggttgagaacaacgacaagtcgtacatcgcacagaacgtaaac
gggaccggaccgttcaaactcgattcgtacaccgaagacgaagtcgtcgtcttctccgcg
tacgaagagtactggcaggaacgcgcagcggtcgatacactcaccttccgtgccgcatcc
gaggccagtacgcgcgtgaaccaactcctccaaggcgaaacggatgtcatcgtgaacgtc
ccgccacaggaggtttcgcgcatcaacaactccgacaatgccagcatcgccgcggcaccg
tcgacccggattatctacaacgggcttcggtacgacctcgaaccgttcgattcggtcaaa
ttccgtcaggcgctgaactacgccatcgacctcgaaagtatcgttcagaatatcctcggt
gggttcggcgcacagacgggccagccgacgcttcccgagttcgtcggtcacaaccccgat
atcgacccgtatccgtacgaccccgacatggccgagcaactcgtcgaggagtccggctac
gccggtgccgaaatcgaactcaatacgccggtcggtcggtatctgaaggacctcgaagtc
gcacaggcggtcgtcggctacatcgacgaactcccgaacgtcacggcgacggttcgtcag
cgtgacttcgggtcgctcgtggacgaactcctcgcaggttctatcgaaaagcgtccaccg
tggtttctcatcggctggggcgaagcgaccttcgatggcggtctcgtcatggaagcgctt
ctcgcgtcggacgggacgctcaccacgtggaagaacgacgagttcgattcgcttctcgaa
caggccggaaaccagtccggcgaggagcgagaggcgacgctccaggaggcgaacgcactc
gcacacgagcaggctccatggatattcctgaaccagcagttcagcgtctacggcgtcaac
aacgccatcaaatgggaaccccgctccgacgagcgcattgatgcatacgcgatgagccaa
ccgtag
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