Haloferax mediterranei: HFX_2489
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Entry
HFX_2489 CDS
T02129
Symbol
birA
Name
(GenBank) BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
hme
Haloferax mediterranei
Pathway
hme00780
Biotin metabolism
hme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
HFX_2489 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hme03000
]
HFX_2489 (birA)
Enzymes [BR:
hme01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
HFX_2489 (birA)
Transcription factors [BR:
hme03000
]
Prokaryotic type
Helix-turn-helix
Other families
HFX_2489 (birA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HVO_A0261_N
HTH_24
HTH_20
HTH_5
MarR_2
PF0610-like_N
Fe_dep_repress
HTH_AsnC-type
TrmB
HTH_Crp_2
HTH_23
HTH_IclR
NirdL-like_HTH
HTH_10
DUF5473
Motif
Other DBs
NCBI-ProteinID:
AFK20172
UniProt:
I3R7G2
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All DBs
Position
2153677..2154726
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AA seq
349 aa
AA seq
DB search
MSDTRRTLLDALAEGPVSGPDLADRLGVSRAAVWKHVESLRDDGFGVESTSDGYTITDVP
EYGGPAIEYGLEADYDVEFHEVLASSNDRARELAADGATDVAVIAREQSASKGRKGREWS
APDGGVWMSLLVRPDEPPAHAPLYTLAMAVAVCDAAREAGVDASIKWPNDVIVSRPPQRA
TNDGSSGASASDGGIASEASNRSADSGESDRGYKKLCGILTEMEGEADRISWLIIGPGTN
VNLDPETLPEGATSIAAEAGPVERRVFVQRVLERFEELRDDLDSVLLAWRERADTLGRQV
RVHTASGVVEGKAVDVEHPGTLVVQTDEGETRVHAGDCEHLRPATDDSR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgcgacgcaccctcctcgatgcactcgccgaggggccagtctccggtccc
gacctcgcggaccgactcggcgtctctcgcgccgcggtctggaagcacgtcgaatcactc
cgcgatgacggcttcggcgtcgagagtacaagtgatgggtacaccataaccgacgttccc
gaatacggtggcccggctatcgagtacggactggaggccgactacgacgtggagttccac
gaggttcttgcctcgtcgaacgaccgcgctcgcgaactcgccgccgacggcgcgacggac
gtggccgtcatcgctcgcgagcagtccgccagcaagggccggaagggacgcgagtggtcc
gcacccgacggcggcgtctggatgagcctgctcgtccggcccgacgagccaccggcgcac
gcaccgctgtacacgctcgcgatggccgtcgccgtctgcgatgcggcgcgtgaagcaggt
gttgatgcgagtatcaagtggccgaatgacgttatcgtgagtcgtccgccgcagcgggcg
acgaacgatggctcgtcgggcgcatcagcgtccgacggggggattgcgagcgaagcgagc
aatcgttcggctgactctggcgagtctgaccgcggctacaaaaagctctgcggcatcctc
accgagatggaaggtgaagccgaccgcatctcgtggttaatcatcggacccggtaccaac
gtcaacctcgaccccgagacgctcccggagggtgcgacgagtatcgccgccgaagccggc
ccggtcgaacgccgcgtgttcgtccagcgggtactcgaacggttcgaagaactgcgagat
gacctcgatagcgtcctcctggcgtggcgcgagcgggccgacacgctcggcagacaggtt
cgcgtccacaccgcaagcggcgtggtcgaaggaaaagcggtggacgtagagcaccccgga
acactcgtcgtccaaaccgacgagggtgagacacgcgtccacgccggcgactgcgaacac
ctgcgcccggcaactgacgacagtcgctga
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