Haloferax mediterranei: HFX_2507
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Entry
HFX_2507 CDS
T02129
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hme03016
]
HFX_2507 (truB)
Enzymes [BR:
hme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HFX_2507 (truB)
Transfer RNA biogenesis [BR:
hme03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HFX_2507 (truB)
Prokaryotic type
HFX_2507 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AFK20189
UniProt:
I3R7H9
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All DBs
Position
2130542..2131411
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AA seq
289 aa
AA seq
DB search
MLRDPPEDRSVDDLLSFGVVNLDKPPGPSAHQVTGWVRDMAGLDRAAHSGTLDPKVTGCL
PILLGDATGMAQVFLEGSKEYVSVLELHGPAPADIESTVAEFETKLYQKPPRKSAVSRRL
RVREIYDLDLLEVQDRQALLRIRCESGTYIRKLCHDLGLALGTGGHMGHLRRTATDPFDD
STLVNLHDFKDALAFAEEGDESWIRDIVSPAERALTHLPAVTIANSAAREVANGAPVYAP
GVFDVDDDADHGDLVACFTDDGSAVCLGELVGDADAESGEVVSLEAVLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgctccgagacccacccgaagacagaagcgtcgacgacctgctctcgttcggcgtcgtc
aacctcgacaagccaccggggccgtcagcccaccaggtgaccgggtgggtccgcgacatg
gcgggactcgaccgtgcggcccactcgggaacgctcgacccgaaggtaaccggctgtctg
cccatccttctcggtgatgcaactggcatggcacaggtgttcctcgaaggctcgaaggag
tacgtctcggtgctcgaactccacggccctgcacccgccgatatcgagtcgactgtcgcg
gagttcgagaccaaactctaccagaaaccgccgcgcaagtcggccgtttcgcgccgcctc
cgcgtacgcgagatttacgacctcgacctcctcgaagtacaggaccgacaggcgctcttg
cgaatccgctgtgagtcgggcacctacatccgaaaactctgtcacgacctcgggctcgcg
ctcggcaccggcggccacatgggacatctccgccgcaccgcgaccgaccccttcgacgac
tcgacgctcgtgaacctccacgacttcaaagacgccctcgcgttcgccgaagagggtgat
gaatcctggattcgggatatcgtttcacccgccgaacgggcgctgacgcaccttccggcg
gttaccatcgccaacagcgccgcccgcgaagtcgcaaacggtgcacccgtctacgctccc
ggcgtgttcgacgtggacgacgacgccgaccacggcgacctcgttgcgtgtttcaccgac
gacgggtccgccgtctgtctgggcgaactcgtcggcgatgccgacgccgaatccggcgag
gttgtgtcgctggaagccgtgctggtctga
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