Haloferax mediterranei: HFX_2713
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Entry
HFX_2713 CDS
T02129
Symbol
spoVK
Name
(GenBank) AAA-type ATPase (transitional ATPase-like protein)
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hme
Haloferax mediterranei
Pathway
hme04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HFX_2713 (spoVK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hme03019
]
HFX_2713 (spoVK)
03009 Ribosome biogenesis [BR:
hme03009
]
HFX_2713 (spoVK)
04131 Membrane trafficking [BR:
hme04131
]
HFX_2713 (spoVK)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hme04147
]
HFX_2713 (spoVK)
Messenger RNA biogenesis [BR:
hme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HFX_2713 (spoVK)
Ribosome biogenesis [BR:
hme03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HFX_2713 (spoVK)
Membrane trafficking [BR:
hme04131
]
SNARE
SNARE associated proteins
Others
HFX_2713 (spoVK)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HFX_2713 (spoVK)
Exosome [BR:
hme04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HFX_2713 (spoVK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
TIP49
AAA_33
AAA_22
AAA_14
NPHP3_N
nSTAND3
RNA_helicase
AAA_28
AAA_7
IstB_IS21
AAA_3
AAA_lid_PRS2_C
Mg_chelatase
ABC_tran
DUF815
NB-ARC
SLFN-g3_helicase
AAA_18
Parvo_NS1
AAA_30
Sigma54_activat
AAA_24
AAA_17
PhoH
TsaE
AAA_11
AAA_19
Zeta_toxin
Bac_DnaA
ATPase_2
bpMoxR
ATP-synt_ab
Zot
Motif
Other DBs
NCBI-ProteinID:
AFK20391
UniProt:
I3R831
LinkDB
All DBs
Position
1946012..1948276
Genome browser
AA seq
754 aa
AA seq
DB search
MKLIVKPLKQKDAGRGLAAIDRAAASELDLEGGDFIRIEGPNEGTAIARVWPGYPEDQGT
GIIRIDGRLRQQAGVGIDDRVNVEKADVKPASRVTIALPQNLRIGGNIGTYIRDKLSGQP
VTQGQSIQLPLGFGFMSASSQSVPIKIASTNPEGTVVVTDNTEFQVSQKPAEQITETAAG
DGSGPSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLI
AKAVANEIDASFHTISGPEIMSKYYGESEEQLREVFEEATENSPAIVFIDELDSIAPKRG
EAGGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDTALRRGGRFDREIEIGVPDR
DGRKEILQVHTRNMPLTDDIDLDAYADSTHGFVGADLESLAKESAMHALRRIRPQLDLEA
EEIDAEVLETLRVTEDDFKQALKGIEPSALREVFVEVPDVTWKDVGGLGDTKERLRETIQ
WPLEYPEVFQAMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGE
SEKGVREVFKKARENAPTVVFFDEIDSIAAERGSDTTSSGVTERVVSQLLTELDGLEALE
DVVVIATTNRPDLIDAALLRPGRLDRHVHVPVPDEEARRAILDVHTREKPLADDVDLDKI
ASKTEGYVGADLEALAREASMNASREFIQSVNKEEIDESIGNVRVTMEHFENALDEIGPS
VTDDVRRRYDEIEERFQKSEVERDRDTGVGRTFQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcatcgtcaaaccgctcaaacagaaggacgccggccgtggactcgccgcaatc
gaccgagccgctgcctccgaactcgacctcgaaggcggcgacttcatccgcatcgagggg
ccgaacgagggcaccgcaatcgcgcgcgtctggccgggctaccccgaagaccagggaacg
ggtatcatccgcatcgatggccgtctccgccagcaggctggcgtcggtatcgacgaccgc
gtcaacgtggagaaagcagacgtgaaacccgccagtcgcgtcaccatcgctctcccccag
aacctccgtatcggcggaaacatcgggacgtacatccgcgataagctctcggggcaacct
gtcacgcagggtcagagtatccaactgccgctcggcttcggtttcatgagcgcgtcgagc
cagtcggtgcccatcaagattgcctcgactaatccggagggaacggtcgtcgtcaccgac
aacactgagttccaggtgagccagaaacccgccgagcagattacagagaccgcggcaggt
gacggaagcggtccatccgtaacctacgaagacatcggtggtctcgacaaggaactcgaa
caggtccgagagatgattgaactgccgatgcgtcacccggaactgttcaagcgcctcggc
atcgagccgccgaaaggtgtcctcctgcacggcccgccgggtaccggaaagacgctcatc
gcgaaggccgtcgccaacgaaatcgacgcgtccttccacactatctccgggccggagatt
atgtcgaagtactacggagagtccgaagaacaactccgtgaagtcttcgaggaagcgacc
gagaactcgccagcaatcgtcttcatcgacgaactcgactccatcgcgccaaagcggggt
gaggccggtggcgacgtggaacgccgcgtcgtggcccaactgctctcgctgatggacgga
ctggacgaacgtggcgaagtcgtcgtcatcggtgcgaccaaccgcgtcgacgccatcgac
acggcactccgtcgtggtggccggttcgaccgcgaaatcgaaatcggtgttccggaccgc
gacggccgcaaggagattctgcaggtccacacgcggaacatgccgcttacggacgacatc
gacctcgatgcctacgccgacagcacccacgggttcgtcggtgccgacctcgaatccctc
gccaaggagtcggcgatgcacgcactgcgccgcatccgcccgcaactcgacctcgaggcc
gaggaaatcgacgccgaagtactggagacgcttcgcgtcaccgaggacgacttcaaacag
gcgctcaagggtatcgaaccctcggcactccgcgaggtgttcgtcgaggtccccgacgtt
acgtggaaagatgtcggcggacttggagataccaaagaacgcctccgcgaaaccatccag
tggcccctcgaataccccgaggtgttccaggcgatggacatggacgccgccaagggcgtc
ttgatgtacggtccgccggggacggggaagacccttctcgccaaggccgtcgccaacgag
gcggagtcgaacttcatctcaatcaaggggccggaactcctgaacaagttcgtcggcgag
tccgaaaagggcgtccgcgaagtgttcaagaaagcccgcgagaacgctccgactgtggtg
ttcttcgacgaaatcgactccatcgcggccgaacgcggcagtgatacgacgagttcgggt
gtcacagaacgcgtcgtctcgcaactcctgacggagttggacggtctcgaagcactcgaa
gacgtggtcgttatcgccacgacgaaccggccggacctcatcgacgcggcgctcttgcgc
cccggtcggctggaccgccacgtccacgtccccgtgccggacgaggaggcccgtcgcgcc
atcctcgacgtgcacacgcgcgagaagccgttggccgacgatgtcgacctcgacaaaatc
gcgtccaaaaccgaggggtacgtcggtgccgacctcgaagccctcgcccgcgaggcatcg
atgaacgcctcccgcgagttcatccagagtgtgaacaaagaggaaatcgacgagagcatc
ggcaacgtccgcgtaacgatggaacacttcgaaaacgccctcgacgaaatcggcccgagc
gtcaccgacgacgtgcgccgccgctacgatgaaatcgaagaacgcttccaaaagagcgag
gtcgaacgcgaccgcgataccggcgtcgggcggaccttccagtaa
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