Haloferax mediterranei: HFX_2907
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Entry
HFX_2907 CDS
T02129
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hme03400
]
HFX_2907 (phrB)
Enzymes [BR:
hme01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HFX_2907 (phrB)
DNA repair and recombination proteins [BR:
hme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HFX_2907 (phrB)
Prokaryotic type
HFX_2907 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFK20577
UniProt:
I3R8L7
LinkDB
All DBs
Position
complement(1766023..1767471)
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AA seq
482 aa
AA seq
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MQLHWHRRDLRVVDNRGLTAAAEARPIAPLFVFDQAVLEHAGSPRVRYMLDALAELRASY
QSLGSDLLVAHGDPKAVVPAVAAALEADGVVWNTDYSGVARERDANVRSALDDASVSYES
VHDAIFHPPGSITTNAGDPYSVYTYFWKKWRDRDKPDPYPEPDADSLVDAAVLEAASETL
SDADFDVAVGDLPTISDLGFDEPSADIVSAGTDAARKRLADFCEDAIYRYADDRDYPARN
ATSRLSTDLKFGTIGIREVYAATAEAREGVGGEQDESVETFQSQLAWREFYAHVLRYNPN
VVTENYKEYEHDIQWRDDSDELAAWKEGRTGYPIVDAGMRQLKKEAYMHNRVRMIVASFL
TKDLLCNWRHGYDHFREYLSDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGERYDPD
GEYIKKYVPELEGVAASTIHEWHEISETERDRVAPNYPAPIVDHAERREMALSMFETARG
DD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcactggcaccggcgcgacctgcgagtcgtagacaaccgggggcttacagcg
gccgccgaggcgagacccatcgccccgcttttcgtgttcgaccaggcggtgctcgaacac
gccggttccccgcgcgtccggtacatgctcgacgcgcttgccgagcttcgcgcgtcgtac
cagtcgctcggaagcgacctcctcgtcgcacacggtgaccccaaggcagtcgtccccgct
gtcgcagcagcactcgaagccgacggtgtcgtgtggaacacggattactcgggggtagcc
cgtgaacgcgacgccaacgttcggtcggcgctcgacgacgctagtgtctcctacgagtcg
gttcacgacgctatattccacccgccggggagcattacgacgaacgcaggggacccctac
tcggtgtacacgtatttctggaagaagtggcgcgaccgcgacaagccggacccgtatccg
gaacccgacgcggattcgcttgtcgacgcggcggtgctcgaagccgcttcagagactctt
tccgacgccgatttcgatgtggccgtaggcgaccttccgacgatttccgacctcggcttc
gacgagccatcggccgacatcgtttccgcgggcacggacgcggcgcgaaagcgactcgcc
gacttctgtgaggatgctatctatcggtacgccgacgaccgcgactatccggcgcgaaac
gctacgtcacgactctcgacggacctcaagttcggtacgattggaattcgggaggtgtac
gccgcgactgccgaggcccgcgagggagtcggcggcgagcaagacgaatctgtcgagacg
ttccagtcacaactcgcgtggcgcgaattctacgctcacgtccttcggtacaatccgaac
gtcgtgacggagaactacaaggagtacgaacacgacatccagtggcgcgacgactctgac
gaactggcggcgtggaaagaaggccgcaccggctaccccatcgtcgatgccgggatgcgc
caactgaaaaaagaggcgtacatgcacaaccgcgtccggatgattgtcgcgtcgttcctc
acgaaggacctcctgtgcaattggcgacacggttacgaccacttccgtgagtatctctcg
gaccacgacacggccaacgacaacggcggatggcagtgggccgcatcgacggggaccgat
gctcaaccctacttccgcatcttcaacccgatgacgcagggcgagcgctacgacccggac
ggagagtacatcaagaagtacgtgccggagttggagggcgtggccgccagcaccatccac
gagtggcacgaaataagtgagaccgaacgtgaccgcgtcgctccgaactatcctgctccg
attgtcgaccacgcagagcgccgcgagatggcgctgtcaatgttcgagacggctcgcggc
gacgactga
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