Haloferax mediterranei: HFX_4045
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Entry
HFX_4045 CDS
T02129
Symbol
oppA
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hme
Haloferax mediterranei
Pathway
hme02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HFX_4045 (oppA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hme02000
]
HFX_4045 (oppA)
Transporters [BR:
hme02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HFX_4045 (oppA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Pox_C7_F8A
Motif
Other DBs
NCBI-ProteinID:
AFK20740
UniProt:
I3R930
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All DBs
Position
pHM100:39585..41324
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AA seq
579 aa
AA seq
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MSRKDITQMRSQVGSESVRSRFGDPKSRRNFLKTLGTAGIAGLAGCSGSGESYDGEEQTM
ASSGDSEGTETGMSSGSDSSGSMLRMSATQRFGTIDPAKGTDYTQVLALVNLYDPLVFPD
TEGNLQPHLAEDWIVSDDNKTYTFTLREGATFHSGNPVTAEDVQFSAERFLDINQGYSSL
LGNVLSKENVTVEDDRTVSFTLDRVHSPFLATLVLLFVVDKQRVLDNAEDGDFGNRGDYG
QSFLNDSDAGSGPYELTGFERQAQISFSRYADYWGSFKDRVYDNVTVQIITNDPTVRSLM
KTGELDMSSQFQSEETYEALAAEDDIRVESIPTVTTFYFKINTQKAPTDDPAVREAIAYG
FDYETARNEIAPGSLPAQGPLPTSFGVHNDNIVQPTYDPEKARQILADAGYEEGDITVQN
TYVKDYGLEEKMGLLFQQNMDEIGINVELNPQTWGTMTELATSVEQTPHINQVFYGPVYP
SPDTVFYNQYHSEAASTWMSMEHLEDETVDSLIDEARSTVDADTRAELYAEVQERIANQY
PDLFIFVQSKKHAFADDVKGYTFRPSMSFDYWFPDFYQE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaaaagatatcacacagatgcgatcgcaagttgggtcggagtctgtccgctct
cgctttggtgacccgaagagtcgtcgaaacttcctcaaaaccctcgggacagcgggtatc
gccggactcgctggctgttccggcagcggcgagagttacgacggcgaagaacagaccatg
gcctcgagcggcgactccgagggaacggagacagggatgtcgtccggcagcgactccagt
ggctcgatgctccggatgagcgcgacccagcgcttcgggaccatcgaccctgcgaagggg
acagactacacgcaggtgctcgcgttggtcaacctctacgacccgctcgtgttccccgac
acggaggggaacctgcagccgcacctcgcagaggactggatagtctcggacgacaacaag
acctacacgttcacgctcagggagggcgcgacgttccacagcggcaaccccgtcacggca
gaggacgtccaattctcggctgagcgattcctcgatatcaaccagggttactcgtcgctg
cttggaaatgtcctctcgaaggagaacgtgaccgtcgaggacgatcggacggtgtcgttc
acactcgaccgcgtccactcgccgttcctcgcgacgctcgtgttgctgttcgtcgtggac
aaacagcgcgttctcgacaacgctgaagacggcgacttcggcaaccgcggcgactacggt
cagtcgttcctcaacgacagcgacgccggctccggcccgtacgaactcacggggttcgag
cggcaggcacagatttcgttcagccgctacgccgactactgggggtcgttcaaagacaga
gtgtacgacaacgtcaccgtccaaatcatcaccaacgacccgaccgtccgctcgctgatg
aagacgggcgaacttgacatgtcgagccagttccaaagcgaggagacctacgaggcgctc
gcggccgaagacgacatccgtgtcgaatcgatcccgacggtgacgacgttctacttcaaa
atcaacacccagaaggcaccgaccgacgaccccgccgtccgcgaggcgatagcctacggc
ttcgactacgagacggcgcgcaacgaaattgcgccggggtcgctccccgcacagggaccg
ctcccgacgtcgttcggtgtccacaacgacaacatcgtccagccgacctacgaccccgag
aaggcgcggcagattctcgccgacgccggctacgaggagggtgacatcaccgtccagaac
acctacgtgaaggactacggcctcgaggagaagatgggcctgctcttccagcagaacatg
gacgaaatcggcatcaacgtcgagttgaacccgcagacgtgggggacgatgaccgaactc
gccacgagcgtcgaacagacgccgcacatcaaccaggtgttctacgggccggtgtacccc
tcgcccgacacagtgttctacaaccagtaccactccgaggccgcgtcgacgtggatgagc
atggaacacctcgaagacgagacggtcgactccctcatcgacgaggcacgctcgacggtc
gacgccgacactcgcgccgaactgtacgccgaggtgcaagaacgcatcgcgaaccagtac
cccgacctgttcatcttcgtccagtcgaagaagcacgccttcgccgacgacgtaaagggc
tacaccttccggccgtcgatgagcttcgactactggttccccgacttctaccaagaatga
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