Haloferax mediterranei: HFX_4066
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Entry
HFX_4066 CDS
T02129
Symbol
tfb8
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hme
Haloferax mediterranei
Pathway
hme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HFX_4066 (tfb8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hme03021
]
HFX_4066 (tfb8)
Transcription machinery [BR:
hme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HFX_4066 (tfb8)
Prokaryotic type
Archaeal type
TFB
HFX_4066 (tfb8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_24
Xre-like-HTH
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AFK20760
UniProt:
I3R950
LinkDB
All DBs
Position
pHM100:complement(61547..62041)
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AA seq
164 aa
AA seq
DB search
MRSAQDAGLFPGRAHEAVAAASVYAVCRCTGLSRTLDEFAPVARVPQSQIISAYKALNTE
LGLPTQPITPAAFVPRVANALDVTDSIRRRARTLAIDTSEEWAHSGATPKAVAAACVYTV
ARDADGQLTQARVATVSGISVKTIQTHHQTLRRYRDETASPNAH
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctcagcacaggacgcgggactctttccggggcgggcacacgaggcagtcgccgca
gcgagtgtctacgccgtctgtcggtgtacggggctttcacgaacgctcgatgagttcgcg
cccgtagcgcgagtcccccaatcacagataatctccgcatacaaggcgctgaatacagag
ttgggactccccacccaaccaattacgccagcagcgttcgtcccacgcgttgccaacgcg
ttggacgtgacagatagcattcgacgacgggctcgaaccctcgctatcgacaccagcgag
gaatgggcgcactcaggagcgaccccgaaagccgtggcagcggcgtgtgtgtatacagtt
gctcgcgatgcggacggccaactcacccaagctcgtgtggcgaccgtctcggggatatcc
gtcaagacgattcaaacgcatcaccagacactccggcgctatcgtgacgagacggcgtca
ccgaacgctcactga
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