Haloferax mediterranei: HFX_4109
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Entry
HFX_4109 CDS
T02129
Symbol
erf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
hme
Haloferax mediterranei
Pathway
hme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HFX_4109 (erf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hme03019
]
HFX_4109 (erf1)
03012 Translation factors [BR:
hme03012
]
HFX_4109 (erf1)
Messenger RNA biogenesis [BR:
hme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HFX_4109 (erf1)
Translation factors [BR:
hme03012
]
Eukaryotic type
Release factors
HFX_4109 (erf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
acVLRF1
baeRF_family10
eRF1_3
eRF1_1
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
AFK20800
UniProt:
I3R990
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Position
pHM100:100759..101835
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AA seq
358 aa
AA seq
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MQTTEYELRDRIDQLTNYRGEGTELITVAVPPDKSLHAVRERIDREYAQAANIKSDQTRT
HVQDALGRIRRLLQAYKETPPSGLVIYAGVVDGELQDAVFDDLDVPVDVSLYRCAAEFEI
APVEQALTPSEVYGLVVLERGRAALGRLAGERIVSSRTFESQVMGKSRAGGQSAQRFERE
RDRQKHEFFEQVADAAEQTFLDEPTVDGVILGGTTITVDEFQQGDYLHHELRDHILGVYP
IEYATKQGLSQLVERAEDVLSDAERRRERESLDRFFTVLGQGGDVAYGADETQTALDYGA
VDVLLVSDARPPAEIRELEEATTDQGGECLVVSTDTDRGAQFDTAFGGLGALLRFPIN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaccgagtacgaactccgcgatcgaatcgaccagctcacaaactaccgtggc
gagggcaccgagctcatcaccgtggccgtcccgccagacaaatcactccatgcggtccgt
gagcgcatcgaccgagaatatgcacaggctgcgaacatcaaatccgatcagacacgaact
cacgtccaggacgctctcggacgcatccgacgcctcctccaagcgtacaaagagacacca
ccaagcggcctcgtcatctacgcaggtgtcgtcgacggtgagctgcaggacgccgtcttc
gacgatctcgacgtccccgtcgacgtctcactgtaccgctgtgcggctgaattcgagata
gcccccgtcgagcaggcgctcaccccgtcagaggtgtacggtctggtcgtcctcgaacgg
ggccgtgccgccctcggtcgcctcgccggcgaacgcatcgtttccagccggaccttcgag
agccaagtgatgggaaaatcccgtgctggcggtcagagtgcgcagcgattcgaacgcgag
cgagaccgacagaaacacgagttcttcgagcaggtcgccgacgctgccgagcagacgttc
ctcgatgagcccactgtcgatggcgtcatcctcggcgggacgacaatcaccgtcgacgag
ttccagcagggtgactatctccaccacgagttgcgggaccacatactaggcgtctatccg
attgagtacgcaaccaagcagggtctctcgcagctcgttgagcgtgccgaggacgtactg
tctgatgctgagcgccgacgggagcgggaatccctcgatcggttcttcacggtgctggga
cagggtggagatgtcgcctacggagctgatgaaacgcaaaccgccctcgactatggagca
gtcgacgtcctcctcgtttccgacgcacggccaccagcagagattcgtgagctggaggaa
gcgacgaccgaccaaggcggtgagtgtctcgttgtgtcgactgacacagatcgaggtgcc
cagttcgatactgcattcgggggtcttggagcgctcctccggtttccgatcaactaa
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