KEGG   Haloferax mediterranei: HFX_4109
Entry
HFX_4109          CDS       T02129                                 
Symbol
erf1
Name
(GenBank) peptide chain release factor 1
  KO
K03265  peptide chain release factor subunit 1
Organism
hme  Haloferax mediterranei
Pathway
hme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hme00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    HFX_4109 (erf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hme03019]
    HFX_4109 (erf1)
   03012 Translation factors [BR:hme03012]
    HFX_4109 (erf1)
Messenger RNA biogenesis [BR:hme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     HFX_4109 (erf1)
Translation factors [BR:hme03012]
 Eukaryotic type
  Release factors
   HFX_4109 (erf1)
SSDB
Motif
Pfam: eRF1_2 acVLRF1 baeRF_family10 eRF1_3 eRF1_1 baeRF_family2
Other DBs
NCBI-ProteinID: AFK20800
UniProt: I3R990
LinkDB
Position
pHM100:100759..101835
AA seq 358 aa
MQTTEYELRDRIDQLTNYRGEGTELITVAVPPDKSLHAVRERIDREYAQAANIKSDQTRT
HVQDALGRIRRLLQAYKETPPSGLVIYAGVVDGELQDAVFDDLDVPVDVSLYRCAAEFEI
APVEQALTPSEVYGLVVLERGRAALGRLAGERIVSSRTFESQVMGKSRAGGQSAQRFERE
RDRQKHEFFEQVADAAEQTFLDEPTVDGVILGGTTITVDEFQQGDYLHHELRDHILGVYP
IEYATKQGLSQLVERAEDVLSDAERRRERESLDRFFTVLGQGGDVAYGADETQTALDYGA
VDVLLVSDARPPAEIRELEEATTDQGGECLVVSTDTDRGAQFDTAFGGLGALLRFPIN
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgcagaccaccgagtacgaactccgcgatcgaatcgaccagctcacaaactaccgtggc
gagggcaccgagctcatcaccgtggccgtcccgccagacaaatcactccatgcggtccgt
gagcgcatcgaccgagaatatgcacaggctgcgaacatcaaatccgatcagacacgaact
cacgtccaggacgctctcggacgcatccgacgcctcctccaagcgtacaaagagacacca
ccaagcggcctcgtcatctacgcaggtgtcgtcgacggtgagctgcaggacgccgtcttc
gacgatctcgacgtccccgtcgacgtctcactgtaccgctgtgcggctgaattcgagata
gcccccgtcgagcaggcgctcaccccgtcagaggtgtacggtctggtcgtcctcgaacgg
ggccgtgccgccctcggtcgcctcgccggcgaacgcatcgtttccagccggaccttcgag
agccaagtgatgggaaaatcccgtgctggcggtcagagtgcgcagcgattcgaacgcgag
cgagaccgacagaaacacgagttcttcgagcaggtcgccgacgctgccgagcagacgttc
ctcgatgagcccactgtcgatggcgtcatcctcggcgggacgacaatcaccgtcgacgag
ttccagcagggtgactatctccaccacgagttgcgggaccacatactaggcgtctatccg
attgagtacgcaaccaagcagggtctctcgcagctcgttgagcgtgccgaggacgtactg
tctgatgctgagcgccgacgggagcgggaatccctcgatcggttcttcacggtgctggga
cagggtggagatgtcgcctacggagctgatgaaacgcaaaccgccctcgactatggagca
gtcgacgtcctcctcgtttccgacgcacggccaccagcagagattcgtgagctggaggaa
gcgacgaccgaccaaggcggtgagtgtctcgttgtgtcgactgacacagatcgaggtgcc
cagttcgatactgcattcgggggtcttggagcgctcctccggtttccgatcaactaa

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