Haloferax mediterranei: HFX_5005
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Entry
HFX_5005 CDS
T02129
Symbol
speE
Name
(GenBank) spermidine synthase
KO
K00797
spermidine synthase [EC:
2.5.1.16
]
Organism
hme
Haloferax mediterranei
Pathway
hme00270
Cysteine and methionine metabolism
hme00330
Arginine and proline metabolism
hme00480
Glutathione metabolism
hme01100
Metabolic pathways
hme01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HFX_5005 (speE)
00330 Arginine and proline metabolism
HFX_5005 (speE)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HFX_5005 (speE)
Enzymes [BR:
hme01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.16 spermidine synthase
HFX_5005 (speE)
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Gene cluster
GFIT
Motif
Pfam:
Spermine_synth
DUF1616
Motif
Other DBs
NCBI-ProteinID:
AFK20842
UniProt:
I3R9D2
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Position
pHM300:4663..6465
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AA seq
600 aa
AA seq
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MSNSRTDTGTLLALTFVVSFCSFAYEFVYSELLTVMYGGTVTQYVITVGLYFFSLGIGAA
LSDDLDAADLGGNFFRTEVFLAAAAPAGFLLIVGLNSVRIPQSVPPELIWTVARLPVVVV
GFLSGFELPLLTHMVDELEDGETAMPVWIQNACNRVHNTVVKGLGTVWSVERTDGRRSGL
SVVLAMDYVGGLVGAVIYARVLYPGLGLIPTIFVLALLNGVAALVFVTYFGDWSRWPVTD
KWSWRSVNENSQSSTRALSVGHVSKTLLVVCLVLTASYAGVVAKHETADEQLSQLYLEQQ
TENKYPPGAMRANVVSQGTTTYQHVIRYNRTWTGTGPNPHFTGKTEQCLRLGSAIQLCES
WADSYHQGLVDVPMSLVEPGPETKVLVVGGGDWIAIDHLRKYNVTVDHVDLDGEFMQQTK
TDPFFRKWHDDAYEYDRLNTTTADGYRYLQESNETYDLVLLDIPGATDDDLLTLYSAEFY
SSIRNHLSDEGVVVTWGYSPDGYPQHHKAFINTVGAAGFTNQLSYWVREDIDSDGQSERI
EQFYVFAPGDRQSLTGDGETAYVRKHREQYRTIEWHAVPRYRGVRVNSIFHPNYDILIDT
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactcacgaactgacaccggaacgctccttgcgctcacattcgtcgtttcattc
tgtagcttcgcctacgagttcgtctactccgaactcttgacagtgatgtacggcggaacc
gtgacgcagtacgtcatcacggttggcttgtatttcttcagcctcggtatcggcgcagcg
ctctccgacgacctcgatgccgcagacctcggcgggaacttcttccgaacggaggtgttt
ctcgccgccgccgcacccgcaggtttcctgctcatcgtcggtctcaatagcgtcagaatc
ccgcagtcggttccgcctgaactcatctggacagtcgcccgtcttcccgtcgtcgtcgtc
gggttcctctcgggattcgagctgccgcttttgactcacatggtcgacgaactcgaagac
ggggagacagcgatgccggtgtggattcaaaatgcctgcaaccgagttcacaataccgtc
gtcaagggtctcgggaccgtctggtccgtcgagcgaaccgatgggcggcggagtggacta
tcggtcgtgctggcgatggactacgtcggcggactcgtcggagctgtcatctacgctcgt
gtcctctatcccggtctcgggctcatcccgacgatattcgtgttggccctgctgaacggg
gttgccgcactcgtgtttgtcacctacttcggggattggtctcggtggccagtcactgat
aagtggtcttggcggtcagtcaatgagaactcgcagtcgtctacccgcgccctctctgtt
ggccacgtctcgaagacgctcctcgtcgtctgtctcgtgctaaccgcgtcatacgcgggc
gtggtcgcgaaacacgaaactgcggacgagcaactgtcgcaactctacttggaacaacag
accgagaacaagtatccaccgggtgcgatgcgtgcaaacgtcgtctcgcaggggacgacc
acgtaccagcacgttatccgatacaatcgcacctggaccgggaccggtccgaatccacac
ttcaccgggaagactgagcagtgtcttcgcttaggctcagcaatacaactgtgtgaaagc
tgggcggacagctatcatcagggtctcgtcgatgtacctatgtcgttggttgaacccggc
ccggagacgaaggttctcgtcgtcggtggcggggactggattgctatcgaccacctccgg
aagtacaacgtcaccgttgaccacgtcgaccttgatggagagttcatgcagcagacgaag
actgacccgttcttccggaagtggcacgacgacgcctacgaatacgaccggttgaacacg
acgacggcggacggatatcgatacctccaagagtcgaacgagacgtacgacctcgttctt
ctcgatatccccggagcgaccgacgacgacctgctcacgctctattcggcggagttctac
agttcgattcgaaaccacctctctgatgagggcgtcgtcgtgacgtggggctactctccc
gacgggtatccgcagcatcacaaagccttcatcaacacggtcggtgccgccggattcacg
aaccagctttcgtactgggttcgagaagacatcgattcggacgggcaatccgaacgcatc
gagcagttctacgtgttcgctccgggcgaccgccaatcactgaccggcgacggtgaaaca
gcctacgtccggaagcatcgcgagcagtaccgcactatcgagtggcacgcagtcccccgc
taccgcggtgtgcgagtgaattccatcttccatccgaactacgacatcctcatcgacacc
taa
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