Haloferax mediterranei: HFX_5238
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Entry
HFX_5238 CDS
T02129
Symbol
troR
Name
(GenBank) transcription repressor
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hme03000
]
HFX_5238 (troR)
Transcription factors [BR:
hme03000
]
Prokaryotic type
Helix-turn-helix
Other families
HFX_5238 (troR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
MarR_2
MarR
HTH_Crp_2
HVO_A0261_N
HTH_24
TrmB
HTH_IclR
Rrf2
GntR
HTH_20
HTH_23
LexA_DNA_bind
HTH_5
HTH_Cmi2_C
DUF6429
wHTH-PRTase_assc
AbiEi_4
HTH_36
HepT-like
HTH_micro
Motif
Other DBs
NCBI-ProteinID:
AFK21070
UniProt:
I3RA10
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All DBs
Position
pHM300:253228..253920
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AA seq
230 aa
AA seq
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MTSSHAAETTPRELTVAMEDAIVGIYRLQETTDERVSTSELAAELGVEPPSVSSIFSRLA
ERGLIDREPHRPVALTETGMKVALQLIRNHRLLETFLVECLGYGWEEVHEECDRLEHHVS
QRFTTSLESFLSNPETDPHGDPIPDTNLDVPTESNLVHLDTVDEGTTVTVQRILTGERET
LEYLASRGLEPEDTVTVEERTPIGLLVISTATGQPRLPTETARQIICSHT
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccagccatgcagcagagacgacgccccgtgaactcacggtcgcaatggaagac
gcaatcgtgggaatctatcgccttcaggagacgacggacgaacgtgtatcgacctcagag
ttagctgcagaactcggtgtcgaaccaccgtcagtttcgagtatcttctcccggctagcc
gagcgggggttgatcgaccgggagccacaccgaccagtcgcacttacagaaacggggatg
aaagtcgcactgcaactcattcgaaatcatcggcttctagaaacgttcctcgtcgagtgt
ctcggatatgggtgggaagaggtccacgaagaatgcgaccgactcgaacatcacgtgagt
cagcggtttacgacatcactcgaatcgttcctctccaacccggagactgacccgcacggt
gacccaattccggatacgaacctcgatgtccccacggagagtaatctagtgcacctcgat
accgtagacgagggaacgacggtgacggttcaacgcatcttgacaggggaacgagagacg
ctcgaatatctcgcaagtagaggactcgaaccagaagataccgtcactgttgaagaacga
accccgattggattactcgtcatttcgacagcgaccggccaaccgcgattgccgaccgaa
accgcacgccaaattatctgttctcacacataa
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