KEGG   Haloferax mediterranei: HFX_6314
Entry
HFX_6314          CDS       T02129                                 
Symbol
cas6
Name
(GenBank) CRISPR-associated Cas6 family protein
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
hme  Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:hme00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hme02048]
    HFX_6314 (cas6)
Prokaryotic defense system [BR:hme02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    HFX_6314 (cas6)
   Subtype I-D factors
    HFX_6314 (cas6)
SSDB
Motif
Pfam: Cas_Cas6_C DUF6945
Other DBs
NCBI-ProteinID: AFK21436
UniProt: I3RB26 A0A4P8P6Z4
LinkDB
Position
pHM500:335230..336042
AA seq 270 aa
MRLMVHLEAQRDATYQTAYHHKLRGRVWRALEGSKFDSEHDNGHPLGLAFSNIFPWGKIQ
EGDRRSLLFASPREDLLATIARGLQRNRDFNVGEMSFEVDDLSQLTVDVGEPGTRGVIET
ATGVVVRLTPEHREQYGIEAEHDAPTYWRPEHTIKPFKDAIRANLQHKHDRFAHEYQDGP
TDVDGELFEGYDLLKTYALPVTVTTGTTLDVVLSKWRFDYRVRNDAHRHHLNLALDAGIG
GRNGLGFGFSNIVEKTKPGESELERADAFA
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcgcttgatggtccatttagaagctcagcgtgacgcaacctaccagactgcgtatcat
cacaaacttcgggggcgggtgtggcgggcgctcgaagggtcgaaattcgacagtgagcac
gacaatgggcatccactcggacttgcgttcagcaatatcttcccgtggggtaaaattcag
gaaggagaccgacgctccttgttattcgcgtctccgcgggaagacttgctcgcgaccatt
gcgcggggcctgcaacgaaaccgcgatttcaacgtcggcgaaatgtcgttcgaggttgac
gacctgtcacaactcaccgtcgatgtcggtgagccaggaacccgcggcgtcatcgagacg
gcaactggcgtcgtcgttcgtttgacccccgagcaccgtgagcaatacggcatcgaagct
gagcacgacgcaccaacgtactggcggcctgaacacactatcaaaccgtttaaagacgcg
attcgggcgaacttacagcacaaacacgaccggttcgctcacgaatatcaggatgggcca
accgatgttgacggcgaactcttcgagggctacgacctcctgaagacgtatgcgcttcct
gtaacggttacaacgggaaccacgcttgatgtcgtgctaagcaagtggcgtttcgattac
cgcgttcgaaacgatgctcaccgccatcaccttaacctcgcactcgatgcgggtatcggc
ggtcgaaatggattgggcttcggattctcgaatatcgtcgagaaaaccaaaccgggtgaa
agcgaactggagagagcagatgctttcgcctga

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